Information for 3-AGAGGAAACAGGMMMG (Motif 3)

C G T A A C T G C T G A A C T G A C T G C T G A C G T A C T G A A G T C C T G A C T A G C T A G G T A C G T C A G T C A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G A G T C A G T C A G C T C T A G A G C T C G A T A G C T A G T C A G T C A G C T A G T C A C G T
p-value:1e-16
log p-value:-3.888e+01
Information Content per bp:1.801
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 26.3bp
Average Position of motif in Background84.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGAGGAAACAGGMMMG
AGAGGAA---------
 C G T A A C T G C T G A A C T G A C T G C T G A C G T A C T G A A G T C C T G A C T A G C T A G G T A C G T C A G T C A A C T G
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGAGGAAACAGGMMMG
NDCAGGAARTNN-----
 A C G T C G T A A C T G C T G A A C T G A C T G C T G A C G T A C T G A A G T C C T G A C T A G C T A G G T A C G T C A G T C A A C T G
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGAGGAAACAGGMMMG
AAGGKGRCGCAGGCA--
 A C G T C G T A A C T G C T G A A C T G A C T G C T G A C G T A C T G A A G T C C T G A C T A G C T A G G T A C G T C A G T C A A C T G
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGAGGAAACAGGMMMG
NACAGGAAAT-------
 A C G T C G T A A C T G C T G A A C T G A C T G C T G A C G T A C T G A A G T C C T G A C T A G C T A G G T A C G T C A G T C A A C T G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGAGGAAACAGGMMMG
NACAGGAAAT-------
 A C G T C G T A A C T G C T G A A C T G A C T G C T G A C G T A C T G A A G T C C T G A C T A G C T A G G T A C G T C A G T C A A C T G
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGAGGAAACAGGMMMG
AGAGGAAGTG------
 C G T A A C T G C T G A A C T G A C T G C T G A C G T A C T G A A G T C C T G A C T A G C T A G G T A C G T C A G T C A A C T G
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGAGGAAACAGGMMMG
--TGTAAACAGGA---
 C G T A A C T G C T G A A C T G A C T G C T G A C G T A C T G A A G T C C T G A C T A G C T A G G T A C G T C A G T C A A C T G
A C G T A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T A C G T A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAGGAAACAGGMMMG
DCCGGAARYN------
 C G T A A C T G C T G A A C T G A C T G C T G A C G T A C T G A A G T C C T G A C T A G C T A G G T A C G T C A G T C A A C T G
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGAGGAAACAGGMMMG
NNNNGGGGGAAGANGG----
 A C G T A C G T A C G T A C G T C G T A A C T G C T G A A C T G A C T G C T G A C G T A C T G A A G T C C T G A C T A G C T A G G T A C G T C A G T C A A C T G
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGAGGAAACAGGMMMG
AACAGGAAGT-------
 A C G T C G T A A C T G C T G A A C T G A C T G C T G A C G T A C T G A A G T C C T G A C T A G C T A G G T A C G T C A G T C A A C T G
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T