Information for 9-GGGACAGTGACTT (Motif 29)

A C T G A C T G A C T G C T G A A G T C C G T A A C T G A C G T A T C G C G T A A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A C T A G C G A T A T G C C G T A A G T C A C G T A C T G A G C T A G T C A G T C G T A C
p-value:1e-8
log p-value:-1.846e+01
Information Content per bp:1.890
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.0 +/- 24.1bp
Average Position of motif in Background48.8 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGGACAGTGACTT-
AGGTCANTGACCTN
 A C T G A C T G A C T G C T G A A G T C C G T A A C T G A C G T A T C G C G T A A G T C A C G T A C G T A C G T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGGACAGTGACTT
---GCAGTGATTT
 A C T G A C T G A C T G C T G A A G T C C G T A A C T G A C G T A T C G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGGACAGTGACTT
--TGCTGTGATTT
 A C T G A C T G A C T G C T G A A G T C C G T A A C T G A C G T A T C G C G T A A G T C A C G T A C G T
A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GGGACAGTGACTT--
------TTGACTTTT
 A C T G A C T G A C T G C T G A A G T C C G T A A C T G A C G T A T C G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGGACAGTGACTT
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A C T G A C T G A C T G C T G A A G T C C G T A A C T G A C G T A T C G C G T A A G T C A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGGACAGTGACTT
CCAGGAACAG------
 A C G T A C G T A C G T A C T G A C T G A C T G C T G A A G T C C G T A A C T G A C G T A T C G C G T A A G T C A C G T A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGGACAGTGACTT-
----CNGTGATTTN
 A C T G A C T G A C T G C T G A A G T C C G T A A C T G A C G T A T C G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGGACAGTGACTT
----NCGTGACN-
 A C T G A C T G A C T G C T G A A G T C C G T A A C T G A C G T A T C G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGGACAGTGACTT----
--AGAAATGACTTCCCT
 A C T G A C T G A C T G C T G A A G T C C G T A A C T G A C G T A T C G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGGACAGTGACTT--
GGGTCAACGAGTTCA
 A C T G A C T G A C T G C T G A A G T C C G T A A C T G A C G T A T C G C G T A A G T C A C G T A C G T A C G T A C G T
C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A