Information for 20-TTTTCAAACRTTTGAG (Motif 28)

A C G T A C G T A G C T C G A T T A G C G T C A G T C A C G T A A G T C C T A G C G A T A G C T C G A T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T G T A C C G T A C T G A C G T A G A T C T C A G A C G T A C G T A C G T A C T G C G T A T C G A G T C A C G T A
p-value:1e-8
log p-value:-1.964e+01
Information Content per bp:1.722
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif16.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets55.4 +/- 17.2bp
Average Position of motif in Background47.2 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTTTCAAACRTTTGAG
CGGTTTCAAA--------
 A C G T A C G T A C G T A C G T A G C T C G A T T A G C G T C A G T C A C G T A A G T C C T A G C G A T A G C T C G A T A C T G C G T A A C T G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TTTTCAAACRTTTGAG
NNTTTTCACACCTTNNN-
 A C G T A C G T A C G T A C G T A G C T C G A T T A G C G T C A G T C A C G T A A G T C C T A G C G A T A G C T C G A T A C T G C G T A A C T G
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:3
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--TTTTCAAACRTTTGAG
NATTGTGCAAT-------
 A C G T A C G T A C G T A C G T A G C T C G A T T A G C G T C A G T C A C G T A A G T C C T A G C G A T A G C T C G A T A C T G C G T A A C T G
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:4
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-TTTTCAAACRTTTGAG
NTTTTCACACCTT----
 A C G T A C G T A C G T A G C T C G A T T A G C G T C A G T C A C G T A A G T C C T A G C G A T A G C T C G A T A C T G C G T A A C T G
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:5
Score:0.48
Offset:7
Orientation:forward strand
Alignment:TTTTCAAACRTTTGAG
-------AGGTGTGA-
 A C G T A C G T A G C T C G A T T A G C G T C A G T C A C G T A A G T C C T A G C G A T A G C T C G A T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:TTTTCAAACRTTTGAG
NATTCAAAT-------
 A C G T A C G T A G C T C G A T T A G C G T C A G T C A C G T A A G T C C T A G C G A T A G C T C G A T A C T G C G T A A C T G
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:7
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:TTTTCAAACRTTTGAG
-TTTCACACCT-----
 A C G T A C G T A G C T C G A T T A G C G T C A G T C A C G T A A G T C C T A G C G A T A G C T C G A T A C T G C G T A A C T G
A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:8
Score:0.47
Offset:5
Orientation:forward strand
Alignment:TTTTCAAACRTTTGAG-
-----AAAGATCAAAGG
 A C G T A C G T A G C T C G A T T A G C G T C A G T C A C G T A A G T C C T A G C G A T A G C T C G A T A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

TBX15/MA0803.1/Jaspar

Match Rank:9
Score:0.47
Offset:7
Orientation:forward strand
Alignment:TTTTCAAACRTTTGAG
-------AGGTGTGA-
 A C G T A C G T A G C T C G A T T A G C G T C A G T C A C G T A A G T C C T A G C G A T A G C T C G A T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.46
Offset:6
Orientation:forward strand
Alignment:TTTTCAAACRTTTGAG
------AAGGTGTGAA
 A C G T A C G T A G C T C G A T T A G C G T C A G T C A C G T A A G T C C T A G C G A T A G C T C G A T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A