Information for 7-GAGTGTGGGA (Motif 16)

C T A G C G T A A T C G A C G T A C T G C G A T A C T G C A T G C T A G C T G A
Reverse Opposite:
A G C T A G T C G T A C A G T C G C T A A G T C G T C A A T G C C G A T A G T C
p-value:1e-10
log p-value:-2.317e+01
Information Content per bp:1.827
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif3.28%
Number of Background Sequences with motif258.9
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets48.9 +/- 23.9bp
Average Position of motif in Background48.2 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GAGTGTGGGA----
TGCGGAGTGGGACTGG
 A C G T A C G T C T A G C G T A A T C G A C G T A C T G C G A T A C T G C A T G C T A G C T G A A C G T A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGTGGGA----
NNGCGTGTGTGCNGCN
 A C G T A C G T C T A G C G T A A T C G A C G T A C T G C G A T A C T G C A T G C T A G C T G A A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GAGTGTGGGA---
---CSTGGGAAAD
 C T A G C G T A A T C G A C G T A C T G C G A T A C T G C A T G C T A G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAGTGTGGGA-
-TGCGTGGGYG
 C T A G C G T A A T C G A C G T A C T G C G A T A C T G C A T G C T A G C T G A A C G T
A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAGTGTGGGA---
-NGCGTGGGCGGR
 C T A G C G T A A T C G A C G T A C T G C G A T A C T G C A T G C T A G C T G A A C G T A C G T A C G T
A C G T A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAGTGTGGGA
NTGGGTGTGGCC
 A C G T A C G T C T A G C G T A A T C G A C G T A C T G C G A T A C T G C A T G C T A G C T G A
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAGTGTGGGA
TGGGTGTGGC-
 A C G T C T A G C G T A A T C G A C G T A C T G C G A T A C T G C A T G C T A G C T G A
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T

Klf1/MA0493.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAGTGTGGGA
TGGGTGTGGCN
 A C G T C T A G C G T A A T C G A C G T A C T G C G A T A C T G C A T G C T A G C T G A
C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAGTGTGGGA-
-AAGGTGTKAA
 C T A G C G T A A T C G A C G T A C T G C G A T A C T G C A T G C T A G C T G A A C G T
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAGTGTGGGA
TTRAGTGSYK--
 A C G T A C G T C T A G C G T A A T C G A C G T A C T G C G A T A C T G C A T G C T A G C T G A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T