Information for 11-AGACAGAGGGCWCTCC (Motif 13)

C T G A A C T G C T G A A T G C C G T A A T C G C G T A A C T G A C T G C T A G T A G C G C T A A G T C C G A T A G T C G T A C
Reverse Opposite:
A C T G A C T G C G T A A C T G C G A T A T C G A G T C G T A C G T A C A C G T A T G C A C G T A T C G A G C T A G T C A G C T
p-value:1e-11
log p-value:-2.533e+01
Information Content per bp:1.745
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.7 +/- 18.1bp
Average Position of motif in Background44.5 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGACAGAGGGCWCTCC
-AACAGATGGC-----
 C T G A A C T G C T G A A T G C C G T A A T C G C G T A A C T G A C T G C T A G T A G C G C T A A G T C C G A T A G T C G T A C
A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGACAGAGGGCWCTCC
GTAGGGCAAAGGTCA----
 A C G T A C G T A C G T C T G A A C T G C T G A A T G C C G T A A T C G C G T A A C T G A C T G C T A G T A G C G C T A A G T C C G A T A G T C G T A C
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGACAGAGGGCWCTCC
TAGGGCAAAGGTCA----
 A C G T A C G T C T G A A C T G C T G A A T G C C G T A A T C G C G T A A C T G A C T G C T A G T A G C G C T A A G T C C G A T A G T C G T A C
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGACAGAGGGCWCTCC
-AACAGATGGT-----
 C T G A A C T G C T G A A T G C C G T A A T C G C G T A A C T G A C T G C T A G T A G C G C T A A G T C C G A T A G T C G T A C
A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGACAGAGGGCWCTCC
TGGGGCAAAGGTCA----
 A C G T A C G T C T G A A C T G C T G A A T G C C G T A A T C G C G T A A C T G A C T G C T A G T A G C G C T A A G T C C G A T A G T C G T A C
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGACAGAGGGCWCTCC
-AACAKATGGY-----
 C T G A A C T G C T G A A T G C C G T A A T C G C G T A A C T G A C T G C T A G T A G C G C T A A G T C C G A T A G T C G T A C
A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AGACAGAGGGCWCTCC
AAACAGACAAAGGAAT----
 A C G T A C G T A C G T A C G T C T G A A C T G C T G A A T G C C G T A A T C G C G T A A C T G A C T G C T A G T A G C G C T A A G T C C G A T A G T C G T A C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGACAGAGGGCWCTCC
AAGGCCAGATGGTCCGG-
 A C G T A C G T C T G A A C T G C T G A A T G C C G T A A T C G C G T A A C T G A C T G C T A G T A G C G C T A A G T C C G A T A G T C G T A C
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGACAGAGGGCWCTCC
AAAACAAAGG-------
 A C G T C T G A A C T G C T G A A T G C C G T A A T C G C G T A A C T G A C T G C T A G T A G C G C T A A G T C C G A T A G T C G T A C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGACAGAGGGCWCTCC
AGGGGTCAGAGGTCA----
 A C G T A C G T A C G T C T G A A C T G C T G A A T G C C G T A A T C G C G T A A C T G A C T G C T A G T A G C G C T A A G T C C G A T A G T C G T A C
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T