Information for 8-CGGCTCCCAGGYGTTA (Motif 10)

A G T C A T C G A C T G A G T C A C G T A G T C A G T C G T A C T C G A A C T G C T A G A G T C A C T G A C G T A C G T G C T A
Reverse Opposite:
C G A T G T C A G T C A T A G C C T A G A G T C A G T C A G C T A C T G A C T G C T A G G T C A A C T G A G T C A T G C C T A G
p-value:1e-11
log p-value:-2.647e+01
Information Content per bp:1.771
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.2 +/- 18.0bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CGGCTCCCAGGYGTTA
--GCTCCG--------
 A G T C A T C G A C T G A G T C A C G T A G T C A G T C G T A C T C G A A C T G C T A G A G T C A C T G A C G T A C G T G C T A
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CGGCTCCCAGGYGTTA
AGCTCGGCGCCAAAAGC---
 A C G T A C G T A C G T A C G T A G T C A T C G A C T G A G T C A C G T A G T C A G T C G T A C T C G A A C T G C T A G A G T C A C T G A C G T A C G T G C T A
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CGGCTCCCAGGYGTTA
CCTTCGGCGCCAAAAGG---
 A C G T A C G T A C G T A C G T A G T C A T C G A C T G A G T C A C G T A G T C A G T C G T A C T C G A A C T G C T A G A G T C A C T G A C G T A C G T G C T A
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGGCTCCCAGGYGTTA
-GGCACCCAGGGGTGC
 A G T C A T C G A C T G A G T C A C G T A G T C A G T C G T A C T C G A A C T G C T A G A G T C A C T G A C G T A C G T G C T A
A C G T T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGGCTCCCAGGYGTTA
-GGGGCCGAGGCCTG-
 A G T C A T C G A C T G A G T C A C G T A G T C A G T C G T A C T C G A A C T G C T A G A G T C A C T G A C G T A C G T G C T A
A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGGCTCCCAGGYGTTA
-TGCCCCCGGGCA---
 A G T C A T C G A C T G A G T C A C G T A G T C A G T C G T A C T C G A A C T G C T A G A G T C A C T G A C G T A C G T G C T A
A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CGGCTCCCAGGYGTTA
TTTGGCGCCAAA------
 A C G T A C G T A G T C A T C G A C T G A G T C A C G T A G T C A G T C G T A C T C G A A C T G C T A G A G T C A C T G A C G T A C G T G C T A
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CGGCTCCCAGGYGTTA
---TGCCCAGNHW---
 A G T C A T C G A C T G A G T C A C G T A G T C A G T C G T A C T C G A A C T G C T A G A G T C A C T G A C G T A C G T G C T A
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CGGCTCCCAGGYGTTA
------CNAGGCCT--
 A G T C A T C G A C T G A G T C A C G T A G T C A G T C G T A C T C G A A C T G C T A G A G T C A C T G A C G T A C G T G C T A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CGGCTCCCAGGYGTTA
-----NNCAGGTGTN-
 A G T C A T C G A C T G A G T C A C G T A G T C A G T C G T A C T C G A A C T G C T A G A G T C A C T G A C G T A C G T G C T A
A C G T A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T