Information for 1-NTGRKCTATTTTTAGC (Motif 1)

C G A T C G A T C T A G C T G A C A T G A G T C A C G T C G T A C G A T C G A T G C A T C G A T C G A T C T G A T C A G G T A C
Reverse Opposite:
C A T G A G T C A G C T G C T A C G T A C G T A C G T A C G T A A C G T C G T A T C A G G T A C G A C T A G T C G C T A C G A T
p-value:1e-54
log p-value:-1.266e+02
Information Content per bp:1.599
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif8.74%
Number of Background Sequences with motif187.5
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets49.1 +/- 25.2bp
Average Position of motif in Background48.7 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:1
Score:0.97
Offset:4
Orientation:forward strand
Alignment:NTGRKCTATTTTTAGC
----GCTATTTTTAGC
 C G A T C G A T C T A G C T G A C A T G A G T C A C G T C G T A C G A T C G A T G C A T C G A T C G A T C T G A T C A G G T A C
A C G T A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MEF2A/MA0052.3/Jaspar

Match Rank:2
Score:0.96
Offset:4
Orientation:reverse strand
Alignment:NTGRKCTATTTTTAGC
----TCTATTTTTAGA
 C G A T C G A T C T A G C T G A C A T G A G T C A C G T C G T A C G A T C G A T G C A T C G A T C G A T C T G A T C A G G T A C
A C G T A C G T A C G T A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.96
Offset:4
Orientation:reverse strand
Alignment:NTGRKCTATTTTTAGC
----KCTATTTTTRGH
 C G A T C G A T C T A G C T G A C A T G A G T C A C G T C G T A C G A T C G A T G C A T C G A T C G A T C T G A T C A G G T A C
A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2D/MA0773.1/Jaspar

Match Rank:4
Score:0.95
Offset:4
Orientation:reverse strand
Alignment:NTGRKCTATTTTTAGC
----TCTATTTATAGN
 C G A T C G A T C T A G C T G A C A T G A G T C A C G T C G T A C G A T C G A T G C A T C G A T C G A T C T G A T C A G G T A C
A C G T A C G T A C G T A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

MEF2B/MA0660.1/Jaspar

Match Rank:5
Score:0.95
Offset:4
Orientation:reverse strand
Alignment:NTGRKCTATTTTTAGC
----GCTATTTATAGC
 C G A T C G A T C T A G C T G A C A T G A G T C A C G T C G T A C G A T C G A T G C A T C G A T C G A T C T G A T C A G G T A C
A C G T A C G T A C G T A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.94
Offset:3
Orientation:reverse strand
Alignment:NTGRKCTATTTTTAGC--
---TTCTATTTTTAGNNN
 C G A T C G A T C T A G C T G A C A T G A G T C A C G T C G T A C G A T C G A T G C A T C G A T C G A T C T G A T C A G G T A C A C G T A C G T
A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:7
Score:0.93
Offset:4
Orientation:forward strand
Alignment:NTGRKCTATTTTTAGC
----GCTATTTTTGGM
 C G A T C G A T C T A G C T G A C A T G A G T C A C G T C G T A C G A T C G A T G C A T C G A T C G A T C T G A T C A G G T A C
A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.91
Offset:5
Orientation:reverse strand
Alignment:NTGRKCTATTTTTAGC
-----CTATTTTTGG-
 C G A T C G A T C T A G C T G A C A T G A G T C A C G T C G T A C G A T C G A T G C A T C G A T C G A T C T G A T C A G G T A C
A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.78
Offset:5
Orientation:forward strand
Alignment:NTGRKCTATTTTTAGC
-----CCATATATGG-
 C G A T C G A T C T A G C T G A C A T G A G T C A C G T C G T A C G A T C G A T G C A T C G A T C G A T C T G A T C A G G T A C
A C G T A C G T A C G T A C G T A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:NTGRKCTATTTTTAGC
NNNNNNCTTTTATAN-
 C G A T C G A T C T A G C T G A C A T G A G T C A C G T C G T A C G A T C G A T G C A T C G A T C G A T C T G A T C A G G T A C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T