Information for 6-CAMAGGGAGRYRA (Motif 8)

T A G C C G T A T G A C C G T A A C T G A C T G T A C G C G T A C T A G C T G A A G C T C T A G C G T A
Reverse Opposite:
A C G T A G T C T C G A A G C T A G T C A C G T A T G C G T A C A G T C A C G T A C T G A C G T A T C G
p-value:1e-12
log p-value:-2.788e+01
Information Content per bp:1.774
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif60.7
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets54.9 +/- 31.3bp
Average Position of motif in Background52.2 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAMAGGGAGRYRA
AACAGGAAGT---
 T A G C C G T A T G A C C G T A A C T G A C T G T A C G C G T A C T A G C T G A A G C T C T A G C G T A
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CAMAGGGAGRYRA
ACATCAAAGGNA-----
 A C G T A C G T A C G T A C G T T A G C C G T A T G A C C G T A A C T G A C T G T A C G C G T A C T A G C T G A A G C T C T A G C G T A
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAMAGGGAGRYRA
CACAGN-------
 T A G C C G T A T G A C C G T A A C T G A C T G T A C G C G T A C T A G C T G A A G C T C T A G C G T A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CAMAGGGAGRYRA
AAAGATCAAAGGAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A T G A C C G T A A C T G A C T G T A C G C G T A C T A G C T G A A G C T C T A G C G T A
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAMAGGGAGRYRA
AACAAAGG-------
 A C G T A C G T T A G C C G T A T G A C C G T A A C T G A C T G T A C G C G T A C T A G C T G A A G C T C T A G C G T A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAMAGGGAGRYRA
-ACAGGAAGTG--
 T A G C C G T A T G A C C G T A A C T G A C T G T A C G C G T A C T A G C T G A A G C T C T A G C G T A
A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CAMAGGGAGRYRA
ACATCAAAGG-------
 A C G T A C G T A C G T A C G T T A G C C G T A T G A C C G T A A C T G A C T G T A C G C G T A C T A G C T G A A G C T C T A G C G T A
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CAMAGGGAGRYRA
AAAACAAAGG-------
 A C G T A C G T A C G T A C G T T A G C C G T A T G A C C G T A A C T G A C T G T A C G C G T A C T A G C T G A A G C T C T A G C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CAMAGGGAGRYRA
ACWTCAAAGG-------
 A C G T A C G T A C G T A C G T T A G C C G T A T G A C C G T A A C T G A C T G T A C G C G T A C T A G C T G A A G C T C T A G C G T A
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------CAMAGGGAGRYRA
TATAGATCAAAGGAAAA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A T G A C C G T A A C T G A C T G T A C G C G T A C T A G C T G A A G C T C T A G C G T A
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A A C G T A C G T A C G T