p-value: | 1e-7 |
log p-value: | -1.652e+01 |
Information Content per bp: | 1.924 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.48% |
Number of Background Sequences with motif | 2.1 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 41.8 +/- 24.2bp |
Average Position of motif in Background | 38.2 +/- 11.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCCTTGGTGACTG TTGCCATGGCAACN- |
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RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
Match Rank: | 2 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCCTTGGTGACTG GTTGCCATGGCAACCG |
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PB0158.1_Rfx3_2/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GCCTTGGTGACTG----- ACTGACCCTTGGTTACCACAAAG |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCCTTGGTGACTG GTTGCCATGGCAAC-- |
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Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GCCTTGGTGACTG KGTTGCCATGGCAAC-- |
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PB0160.1_Rfxdc2_2/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCCTTGGTGACTG--- CTACTTGGATACGGAAT |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCCTTGGTGACTG- GTCATGCHTGRCTGS |
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Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCCTTGGTGACTG TGACCTTGAN----- |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCCTTGGTGACTG -SCCTAGCAACAG |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCCTTGGTGACTG TTGCCATGGCAACC- |
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