Information for 5-TGGCCTGTTTGTTAGG (Motif 12)

A C G T A C T G A T C G A T G C A G T C A C G T A C T G A G C T A C G T A C G T A C T G A C G T A G C T C G T A A C T G A C T G
Reverse Opposite:
T A G C A G T C A C G T C T G A C G T A G T A C C G T A C G T A C T G A A G T C C G T A A C T G A T C G A T G C A G T C C G T A
p-value:1e-10
log p-value:-2.491e+01
Information Content per bp:1.923
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.4 +/- 7.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TGGCCTGTTTGTTAGG---
----NCNTTTGTTATTTNN
 A C G T A C T G A T C G A T G C A G T C A C G T A C T G A G C T A C G T A C G T A C T G A C G T A G C T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGGCCTGTTTGTTAGG
TGACCTARTT------
 A C G T A C T G A T C G A T G C A G T C A C G T A C T G A G C T A C G T A C G T A C T G A C G T A G C T C G T A A C T G A C T G
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TGGCCTGTTTGTTAGG
-------ATTGTT---
 A C G T A C T G A T C G A T G C A G T C A C G T A C T G A G C T A C G T A C G T A C T G A C G T A G C T C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TGGCCTGTTTGTTAGG
-----TGTTTATTT--
 A C G T A C T G A T C G A T G C A G T C A C G T A C T G A G C T A C G T A C G T A C T G A C G T A G C T C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGGCCTGTTTGTTAGG
--TCCTGTTTACA---
 A C G T A C T G A T C G A T G C A G T C A C G T A C T G A G C T A C G T A C G T A C T G A C G T A G C T C G T A A C T G A C T G
A C G T A C G T C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGGCCTGTTTGTTAGG-
--CTATAATTGTTAGCG
 A C G T A C T G A T C G A T G C A G T C A C G T A C T G A G C T A C G T A C G T A C T G A C G T A G C T C G T A A C T G A C T G A C G T
A C G T A C G T G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

POL007.1_BREd/Jaspar

Match Rank:7
Score:0.51
Offset:6
Orientation:forward strand
Alignment:TGGCCTGTTTGTTAGG
------GTTTGTT---
 A C G T A C T G A T C G A T G C A G T C A C G T A C T G A G C T A C G T A C G T A C T G A C G T A G C T C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TGGCCTGTTTGTTAGG
--GAATGTTTGTTT--
 A C G T A C T G A T C G A T G C A G T C A C G T A C T G A G C T A C G T A C G T A C T G A C G T A G C T C G T A A C T G A C T G
A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TGGCCTGTTTGTTAGG
-GGNGCGNCTGTTNNN
 A C G T A C T G A T C G A T G C A G T C A C G T A C T G A G C T A C G T A C G T A C T G A C G T A G C T C G T A A C T G A C T G
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TGGCCTGTTTGTTAGG
AGGVNCCTTTGT----
 A C G T A C T G A T C G A T G C A G T C A C G T A C T G A G C T A C G T A C G T A C T G A C G T A G C T C G T A A C T G A C T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T