Information for 8-TTBGVAAACTCATATA (Motif 7)

A C G T C A G T A C G T A C T G T G A C G T C A C G T A C G T A A G T C A C G T A G T C G T C A A C G T T C G A A C G T C G T A
Reverse Opposite:
A C G T T G C A A G C T C G T A A C G T A C T G C G T A C T A G A C G T A C G T A C G T A C T G A G T C T G C A G T C A C G T A
p-value:1e-13
log p-value:-3.206e+01
Information Content per bp:1.813
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.2 +/- 27.6bp
Average Position of motif in Background41.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0136.1_IRC900814_2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTBGVAAACTCATATA-
-ATGGAAAGTCGTAAAA
 A C G T C A G T A C G T A C T G T G A C G T C A C G T A C G T A A G T C A C G T A G T C G T C A A C G T T C G A A C G T C G T A A C G T
A C G T C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTBGVAAACTCATATA
---GGAAATTCCC---
 A C G T C A G T A C G T A C T G T G A C G T C A C G T A C G T A A G T C A C G T A G T C G T C A A C G T T C G A A C G T C G T A
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TTBGVAAACTCATATA
---GGAAATTCCC---
 A C G T C A G T A C G T A C T G T G A C G T C A C G T A C G T A A G T C A C G T A G T C G T C A A C G T T C G A A C G T C G T A
A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TTBGVAAACTCATATA--
-GACCACATTCATACAAT
 A C G T C A G T A C G T A C T G T G A C G T C A C G T A C G T A A G T C A C G T A G T C G T C A A C G T T C G A A C G T C G T A A C G T A C G T
A C G T T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TTBGVAAACTCATATA---
-----ACATTCATGACACG
 A C G T C A G T A C G T A C T G T G A C G T C A C G T A C G T A A G T C A C G T A G T C G T C A A C G T T C G A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TTBGVAAACTCATATA
---GAATATTCAT---
 A C G T C A G T A C G T A C T G T G A C G T C A C G T A C G T A A G T C A C G T A G T C G T C A A C G T T C G A A C G T C G T A
A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TTBGVAAACTCATATA-
AAGGCGAAATCATCGCA
 A C G T C A G T A C G T A C T G T G A C G T C A C G T A C G T A A G T C A C G T A G T C G T C A A C G T T C G A A C G T C G T A A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTBGVAAACTCATATA
NNTGGAAANN------
 A C G T C A G T A C G T A C T G T G A C G T C A C G T A C G T A A G T C A C G T A G T C G T C A A C G T T C G A A C G T C G T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTBGVAAACTCATATA
AATGGAAAAT------
 A C G T C A G T A C G T A C T G T G A C G T C A C G T A C G T A A G T C A C G T A G T C G T C A A C G T T C G A A C G T C G T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TTBGVAAACTCATATA----
----AAAGCTCGTAAAATTT
 A C G T C A G T A C G T A C T G T G A C G T C A C G T A C G T A A G T C A C G T A G T C G T C A A C G T T C G A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T