Information for 25-GTTATTCTCACCAGAG (Motif 40)

A C T G A C G T A C G T C G T A C G A T A C G T A G T C A C G T A G T C G T C A G T A C A G T C C G T A A T C G C T G A A T C G
Reverse Opposite:
A T G C A G C T A T G C A C G T C T A G A C T G A C G T A C T G C G T A A C T G C G T A C G T A A C G T C G T A C G T A A G T C
p-value:1e-5
log p-value:-1.246e+01
Information Content per bp:1.903
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.8 +/- 21.6bp
Average Position of motif in Background50.3 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFX(?)/Promoter/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GTTATTCTCACCAGAG
---ATTCTCGCGAGA-
 A C T G A C G T A C G T C G T A C G A T A C G T A G T C A C G T A G T C G T C A G T A C A G T C C G T A A T C G C T G A A T C G
A C G T A C G T A C G T T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A A C G T

PH0123.1_Obox3/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTTATTCTCACCAGAG
ATAGTTAATCCCCCNNA--
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G A T A C G T A G T C A C G T A G T C G T C A G T A C A G T C C G T A A T C G C T G A A T C G
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A A C G T A C G T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTTATTCTCACCAGAG--
---GTTCTCGCGAGANCC
 A C T G A C G T A C G T C G T A C G A T A C G T A G T C A C G T A G T C G T C A G T A C A G T C C G T A A T C G C T G A A T C G A C G T A C G T
A C G T A C G T A C G T T A C G G A C T G A C T T G A C A G C T A G T C C A T G G T A C A C T G T C G A A C T G T C G A A C G T A G T C A T G C

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTTATTCTCACCAGAG
---ATTAACACCT---
 A C T G A C G T A C G T C G T A C G A T A C G T A G T C A C G T A G T C G T C A G T A C A G T C C G T A A T C G C T G A A T C G
A C G T A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T

PH0122.1_Obox2/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GTTATTCTCACCAGAG
ATAGTTAATCCCCCTCA--
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G A T A C G T A G T C A C G T A G T C G T C A G T A C A G T C C G T A A T C G C T G A A T C G
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GTTATTCTCACCAGAG
NTTGTTAATCCCTCTNN--
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G A T A C G T A G T C A C G T A G T C G T C A G T A C A G T C C G T A A T C G C T G A A T C G
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A A C G T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GTTATTCTCACCAGAG
NTAGTTAATCCCCTTAN--
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G A T A C G T A G T C A C G T A G T C G T C A G T A C A G T C C G T A A T C G C T G A A T C G
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------GTTATTCTCACCAGAG
NCNTTTGTTATTTNN-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G A T A C G T A G T C A C G T A G T C G T C A G T A C A G T C C G T A A T C G C T G A A T C G
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GTTATTCTCACCAGAG
NANANTTAATCCCNNNN---
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G A T A C G T A G T C A C G T A G T C G T C A G T A C A G T C C G T A A T C G C T G A A T C G
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A A C G T A C G T A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GTTATTCTCACCAGAG---
----CTCTCGCGAGATCTG
 A C T G A C G T A C G T C G T A C G A T A C G T A G T C A C G T A G T C G T C A G T A C A G T C C G T A A T C G C T G A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G