Information for 19-SRGSAGGGWSCWCAGG (Motif 33)

A T C G C T A G A C T G A T C G C G T A A C T G A C T G A C T G C G T A A T G C A G T C C G A T A G T C C G T A A T C G C T A G
Reverse Opposite:
A G T C A T G C A C G T A C T G C G T A A C T G A T C G C G A T A G T C A G T C A G T C A C G T T A C G A G T C G A C T T A G C
p-value:1e-7
log p-value:-1.740e+01
Information Content per bp:1.833
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 24.6bp
Average Position of motif in Background34.2 +/- 3.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:SRGSAGGGWSCWCAGG--
---AAGGKGRCGCAGGCA
 A T C G C T A G A C T G A T C G C G T A A C T G A C T G A C T G C G T A A T G C A G T C C G A T A G T C C G T A A T C G C T A G A C G T A C G T
A C G T A C G T A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:SRGSAGGGWSCWCAGG
-GGGCGGGACC-----
 A T C G C T A G A C T G A T C G C G T A A C T G A C T G A C T G C G T A A T G C A G T C C G A T A G T C C G T A A T C G C T A G
A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:SRGSAGGGWSCWCAGG
----------CACAGN
 A T C G C T A G A C T G A T C G C G T A A C T G A C T G A C T G C G T A A T G C A G T C C G A T A G T C C G T A A T C G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--SRGSAGGGWSCWCAGG
CACAGCAGGGGG------
 A C G T A C G T A T C G C T A G A C T G A T C G C G T A A C T G A C T G A C T G C G T A A T G C A G T C C G A T A G T C C G T A A T C G C T A G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:SRGSAGGGWSCWCAGG
-----GGGAGGACNG-
 A T C G C T A G A C T G A T C G C G T A A C T G A C T G A C T G C G T A A T G C A G T C C G A T A G T C C G T A A T C G C T A G
A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-SRGSAGGGWSCWCAGG
GGAGAAAGGTGCGA---
 A C G T A T C G C T A G A C T G A T C G C G T A A C T G A C T G A C T G C G T A A T G C A G T C C G A T A G T C C G T A A T C G C T A G
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-SRGSAGGGWSCWCAGG
TGGGGAAGGGCM-----
 A C G T A T C G C T A G A C T G A T C G C G T A A C T G A C T G A C T G C G T A A T G C A G T C C G A T A G T C C G T A A T C G C T A G
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---SRGSAGGGWSCWCAGG
DCHCAGCAGGRGGCC----
 A C G T A C G T A C G T A T C G C T A G A C T G A T C G C G T A A C T G A C T G A C T G C G T A A T G C A G T C C G A T A G T C C G T A A T C G C T A G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-SRGSAGGGWSCWCAGG
GGGGGCGGGGC------
 A C G T A T C G C T A G A C T G A T C G C G T A A C T G A C T G A C T G C G T A A T G C A G T C C G A T A G T C C G T A A T C G C T A G
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:SRGSAGGGWSCWCAGG---
-----NTGCCCANNGGTNA
 A T C G C T A G A C T G A T C G C G T A A C T G A C T G A C T G C G T A A T G C A G T C C G A T A G T C C G T A A T C G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A