Information for 18-TTTTTTTTTTTTGCAG (Motif 29)

A C G T C G A T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A
p-value:1e-8
log p-value:-2.016e+01
Information Content per bp:1.929
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.2 +/- 27.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TTTTTTTTTTTTGCAG---
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C G T A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TTTTTTTTTTTTGCAG---
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTTTTTTTTGCAG
NNNNTTTTTTTTTNAAC--
 A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTTTTTTTTGCAG
GNATTTTTTTTTTGANC--
 A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTTTTTTTTTTTGCAG
-TTTTTTTTCNNGTN-
 A C G T C G A T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G
A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TTTTTTTTTTTTGCAG---
----ANATTTTTGCAANTN
 A C G T C G A T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PB0093.1_Zfp105_1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTTTTTTTTTTTGCAG
NTNTTGTTGTTTGTN-
 A C G T C G A T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTTTTTTTTTTGCAG
NNTTTNTTTTNGNNN-
 A C G T C G A T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G
C G T A C G A T A G C T C G A T A C G T C G A T C G A T C G A T A G C T G C A T T A G C A T C G T A C G A T G C G A C T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTTTTTTTTTTTGCAG
NNTGTTTATTTTGGCA-
 A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTTTTTTTTGCAG
NNTTTTTCTTATNT----
 A C G T A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T A C G T A C G T A C G T A C G T