Information for 16-TAAYAMATTHTGCCAG (Motif 25)

A G C T G T C A C G T A G A C T G C T A T G C A G T C A A C G T A C G T G T A C A C G T A C T G A G T C A G T C C G T A A C T G
Reverse Opposite:
G T A C C G A T A C T G C T A G G T A C C G T A C A G T C G T A C G T A C A G T A C G T C A G T C T G A A C G T A C G T C T G A
p-value:1e-8
log p-value:-2.046e+01
Information Content per bp:1.756
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.7 +/- 22.8bp
Average Position of motif in Background31.3 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.59
Offset:9
Orientation:forward strand
Alignment:TAAYAMATTHTGCCAG-
---------TTGCCAAG
 A G C T G T C A C G T A G A C T G C T A T G C A G T C A A C G T A C G T G T A C A C G T A C T G A G T C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TAAYAMATTHTGCCAG------
------NNNNTGCCAGTGATTG
 A G C T G T C A C G T A G A C T G C T A T G C A G T C A A C G T A C G T G T A C A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:TAAYAMATTHTGCCAG---
---------ATGCCAGACN
 A G C T G T C A C G T A G A C T G C T A T G C A G T C A A C G T A C G T G T A C A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TAAYAMATTHTGCCAG--
---ANATTTTTGCAANTN
 A G C T G T C A C G T A G A C T G C T A T G C A G T C A A C G T A C G T G T A C A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.56
Offset:10
Orientation:forward strand
Alignment:TAAYAMATTHTGCCAG--
----------TGTCANYT
 A G C T G T C A C G T A G A C T G C T A T G C A G T C A A C G T A C G T G T A C A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.56
Offset:8
Orientation:forward strand
Alignment:TAAYAMATTHTGCCAG-
--------CGTGCCAAG
 A G C T G T C A C G T A G A C T G C T A T G C A G T C A A C G T A C G T G T A C A C G T A C T G A G T C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

POU4F2/MA0683.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TAAYAMATTHTGCCAG
CTCATTAATTATGCAT-
 A C G T A G C T G T C A C G T A G A C T G C T A T G C A G T C A A C G T A C G T G T A C A C G T A C T G A G T C A G T C C G T A A C T G
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.56
Offset:10
Orientation:reverse strand
Alignment:TAAYAMATTHTGCCAG
----------TGCCAA
 A G C T G T C A C G T A G A C T G C T A T G C A G T C A A C G T A C G T G T A C A C G T A C T G A G T C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.56
Offset:9
Orientation:forward strand
Alignment:TAAYAMATTHTGCCAG--
---------ATGCCAACC
 A G C T G T C A C G T A G A C T G C T A T G C A G T C A A C G T A C G T G T A C A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TAAYAMATTHTGCCAG------
-----GATATTGACAGCTGCGT
 A G C T G T C A C G T A G A C T G C T A T G C A G T C A A C G T A C G T G T A C A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T