Information for 9-ACTTTTGGTA (Motif 22)

C G T A A T G C A G C T G A C T A C G T A C G T A C T G A T C G C G A T C G T A
Reverse Opposite:
A C G T C G T A A T G C A G T C C G T A G T C A C T G A C T G A A T C G C G A T
p-value:1e-9
log p-value:-2.235e+01
Information Content per bp:1.799
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif77.1
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets43.8 +/- 26.9bp
Average Position of motif in Background52.3 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ACTTTTGGTA-----
NCNTTTGTTATTTNN
 C G T A A T G C A G C T G A C T A C G T A C G T A C T G A T C G C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACTTTTGGTA--
--NNTTGGCANN
 C G T A A T G C A G C T G A C T A C G T A C G T A C T G A T C G C G A T C G T A A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACTTTTGGTA---
ANATTTTTGCAANTN
 A C G T A C G T C G T A A T G C A G C T G A C T A C G T A C G T A C T G A T C G C G A T C G T A A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACTTTTGGTA
-CCWTTGTY-
 C G T A A T G C A G C T G A C T A C G T A C G T A C T G A T C G C G A T C G T A
A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ACTTTTGGTA---------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T C G T A A T G C A G C T G A C T A C G T A C G T A C T G A T C G C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACTTTTGGTA-----
NNCGTTGCTATGGNN
 C G T A A T G C A G C T G A C T A C G T A C G T A C T G A T C G C G A T C G T A A C G T A C G T A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACTTTTGGTA----
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T C G T A A T G C A G C T G A C T A C G T A C G T A C T G A T C G C G A T C G T A A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----ACTTTTGGTA--
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A C G T C G T A A T G C A G C T G A C T A C G T A C G T A C T G A T C G C G A T C G T A A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ACTTTTGGTA-----
NCCGTTGCTANGNGN
 C G T A A T G C A G C T G A C T A C G T A C G T A C T G A T C G C G A T C G T A A C G T A C G T A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ACTTTTGGTA--
NNHTGTGGTTWN
 C G T A A T G C A G C T G A C T A C G T A C G T A C T G A T C G C G A T C G T A A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G