Information for 7-GKTAATCTGC (Motif 18)

A C T G A C T G A C G T C G T A C G T A C A G T A G T C A C G T T C A G T A G C
Reverse Opposite:
A T C G A G T C C G T A T C A G G T C A C G A T C G A T G T C A G T A C G T A C
p-value:1e-10
log p-value:-2.316e+01
Information Content per bp:1.737
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif166.3
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets43.9 +/- 25.8bp
Average Position of motif in Background50.8 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GKTAATCTGC
GCTAATCC--
 A C T G A C T G A C G T C G T A C G T A C A G T A G T C A C G T T C A G T A G C
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GKTAATCTGC----
AGGCTAATCCCCAANG
 A C G T A C G T A C T G A C T G A C G T C G T A C G T A C A G T A G T C A C G T T C A G T A G C A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GKTAATCTGC
-YTAATCCY-
 A C T G A C T G A C G T C G T A C G T A C A G T A G T C A C G T T C A G T A G C
A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GKTAATCTGC
-TTAATCCT-
 A C T G A C T G A C G T C G T A C G T A C A G T A G T C A C G T T C A G T A G C
A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T

PH0123.1_Obox3/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GKTAATCTGC----
ATAGTTAATCCCCCNNA
 A C G T A C G T A C G T A C T G A C T G A C G T C G T A C G T A C A G T A G T C A C G T T C A G T A G C A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

OTX1/MA0711.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GKTAATCTGC
-TTAATCCG-
 A C T G A C T G A C G T C G T A C G T A C A G T A G T C A C G T T C A G T A G C
A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GKTAATCTGC
GCTAATCCCC
 A C T G A C T G A C G T C G T A C G T A C A G T A G T C A C G T T C A G T A G C
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

GSC2/MA0891.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GKTAATCTGC
CCTAATCCGC
 A C T G A C T G A C G T C G T A C G T A C A G T A G T C A C G T T C A G T A G C
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GKTAATCTGC
NYTAATCCYB
 A C T G A C T G A C G T C G T A C G T A C A G T A G T C A C G T T C A G T A G C
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GKTAATCTGC
YSTTATCT--
 A C T G A C T G A C G T C G T A C G T A C A G T A G T C A C G T T C A G T A G C
A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T