Information for 13-GACAATCCGTCTC (Motif 16)

C T A G C G T A A G T C C G T A C G T A A C G T A G T C A T G C A T C G A C G T G T A C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A A T G C T A C G C T A G C G T A C G A T A C G T A C T G A C G T A G T C
p-value:1e-10
log p-value:-2.378e+01
Information Content per bp:1.897
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 25.0bp
Average Position of motif in Background43.7 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GACAATCCGTCTC
GACAATGNN----
 C T A G C G T A A G T C C G T A C G T A A C G T A G T C A T G C A T C G A C G T G T A C A C G T A G T C
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GACAATCCGTCTC
TNCNNAACAATTTTTNC-
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C C G T A C G T A A C G T A G T C A T G C A T C G A C G T G T A C A C G T A G T C
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GACAATCCGTCTC
AACAAT-------
 C T A G C G T A A G T C C G T A C G T A A C G T A G T C A T G C A T C G A C G T G T A C A C G T A G T C
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GACAATCCGTCTC
NAACAAT-------
 A C G T C T A G C G T A A G T C C G T A C G T A A C G T A G T C A T G C A T C G A C G T G T A C A C G T A G T C
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GACAATCCGTCTC
TCACGGAACAATAGGTG--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C C G T A C G T A A C G T A G T C A T G C A T C G A C G T G T A C A C G T A G T C
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GACAATCCGTCTC
RNAACAATGG-----
 A C G T A C G T C T A G C G T A A G T C C G T A C G T A A C G T A G T C A T G C A T C G A C G T G T A C A C G T A G T C
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GACAATCCGTCTC
NNNNNGAACAATTGANN--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C C G T A C G T A A C G T A G T C A T G C A T C G A C G T G T A C A C G T A G T C
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GACAATCCGTCTC
GTAAACAAT-------
 A C G T A C G T A C G T C T A G C G T A A G T C C G T A C G T A A C G T A G T C A T G C A T C G A C G T G T A C A C G T A G T C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GACAATCCGTCTC----
-NNAGTCCCACTCNNNN
 C T A G C G T A A G T C C G T A C G T A A C G T A G T C A T G C A T C G A C G T G T A C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

PH0126.1_Obox6/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GACAATCCGTCTC-
CNATAATCCGNTTNT
 A C G T C T A G C G T A A G T C C G T A C G T A A C G T A G T C A T G C A T C G A C G T G T A C A C G T A G T C A C G T
T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T