p-value: | 1e-11 |
log p-value: | -2.578e+01 |
Information Content per bp: | 1.804 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 1.04% |
Number of Background Sequences with motif | 6.8 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 42.7 +/- 26.7bp |
Average Position of motif in Background | 57.3 +/- 30.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GGGTGGAAATTGC- ----GGAAATTCCC |
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NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer
Match Rank: | 2 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGGTGGAAATTGC -AATGGAAAAT-- |
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NFATC1/MA0624.1/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGGTGGAAATTGC -NNTGGAAANN-- |
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NFATC3/MA0625.1/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGGTGGAAATTGC -AATGGAAAAT-- |
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RELA/MA0107.1/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GGGTGGAAATTGC- ----GGAAATTCCC |
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NFAT5/MA0606.1/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGGTGGAAATTGC -NATGGAAAAN-- |
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NFATC2/MA0152.1/Jaspar
Match Rank: | 7 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GGGTGGAAATTGC ---TGGAAAA--- |
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PB0146.1_Mafk_2/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GGGTGGAAATTGC---- --GAAAAAATTGCAAGG |
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PB0167.1_Sox13_2/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GGGTGGAAATTGC GTATTGGGTGGGTAATT- |
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PB0177.1_Sox7_2/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GGGTGGAAATTGC----------- --GTGCTAATTGTGTGTGTACGCT |
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