Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 665)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 46675)	% of Background Sequences with Motif
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-197	-4.544e+02	0.0000	225.0	33.83%	989.5	2.12%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-171	-3.949e+02	0.0000	122.0	18.35%	142.7	0.31%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-170	-3.933e+02	0.0000	159.0	23.91%	414.3	0.89%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-163	-3.776e+02	0.0000	249.0	37.44%	1904.0	4.08%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-159	-3.682e+02	0.0000	155.0	23.31%	445.3	0.95%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e-159	-3.680e+02	0.0000	194.0	29.17%	945.6	2.03%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-156	-3.592e+02	0.0000	114.0	17.14%	144.2	0.31%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-137	-3.159e+02	0.0000	98.0	14.74%	114.8	0.25%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-112	-2.580e+02	0.0000	205.0	30.83%	2004.7	4.30%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-108	-2.488e+02	0.0000	191.0	28.72%	1760.9	3.77%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-105	-2.431e+02	0.0000	189.0	28.42%	1770.9	3.80%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-105	-2.422e+02	0.0000	177.0	26.62%	1501.4	3.22%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-104	-2.408e+02	0.0000	164.0	24.66%	1235.1	2.65%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-102	-2.365e+02	0.0000	172.0	25.86%	1443.8	3.09%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-100	-2.307e+02	0.0000	120.0	18.05%	540.4	1.16%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-97	-2.250e+02	0.0000	133.0	20.00%	771.6	1.65%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-6	-1.455e+01	0.0000	42.0	6.32%	1250.6	2.68%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-6	-1.385e+01	0.0000	65.0	9.77%	2410.1	5.17%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-4	-1.146e+01	0.0002	89.0	13.38%	3920.6	8.40%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-4	-1.088e+01	0.0003	42.0	6.32%	1455.6	3.12%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e-4	-1.078e+01	0.0004	57.0	8.57%	2228.3	4.78%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-4	-9.859e+00	0.0009	97.0	14.59%	4562.8	9.78%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-2	-6.579e+00	0.0220	57.0	8.57%	2637.4	5.65%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e-2	-6.310e+00	0.0276	7.0	1.05%	119.9	0.26%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e-2	-5.830e+00	0.0428	9.0	1.35%	203.2	0.44%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e-2	-5.293e+00	0.0704	74.0	11.13%	3827.3	8.20%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e-2	-5.156e+00	0.0777	27.0	4.06%	1108.9	2.38%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-1	-4.113e+00	0.2127	5.0	0.75%	102.8	0.22%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-1	-4.050e+00	0.2186	59.0	8.87%	3118.3	6.68%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e-1	-3.797e+00	0.2724	52.0	7.82%	2732.3	5.86%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e-1	-3.565e+00	0.3321	5.0	0.75%	118.6	0.25%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-1	-3.476e+00	0.3519	38.0	5.71%	1933.0	4.14%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e-1	-3.419e+00	0.3612	14.0	2.11%	560.9	1.20%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e-1	-3.351e+00	0.3753	6.0	0.90%	168.5	0.36%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-1	-3.313e+00	0.3786	31.0	4.66%	1538.9	3.30%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e-1	-3.279e+00	0.3807	6.0	0.90%	171.4	0.37%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e-1	-3.257e+00	0.3807	4.0	0.60%	88.3	0.19%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e-1	-3.246e+00	0.3807	30.0	4.51%	1489.0	3.19%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-1	-3.208e+00	0.3807	194.0	29.17%	12179.7	26.10%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e-1	-3.122e+00	0.4009	4.0	0.60%	92.3	0.20%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e-1	-3.091e+00	0.4037	11.0	1.65%	427.8	0.92%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e-1	-3.047e+00	0.4116	26.0	3.91%	1278.2	2.74%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e-1	-2.975e+00	0.4322	19.0	2.86%	879.0	1.88%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e-1	-2.926e+00	0.4435	6.0	0.90%	188.0	0.40%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e-1	-2.900e+00	0.4451	40.0	6.02%	2150.7	4.61%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-1	-2.853e+00	0.4562	17.0	2.56%	778.5	1.67%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-1	-2.806e+00	0.4680	54.0	8.12%	3047.4	6.53%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-1	-2.776e+00	0.4723	191.0	28.72%	12140.2	26.02%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e-1	-2.737e+00	0.4812	9.0	1.35%	348.5	0.75%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e-1	-2.715e+00	0.4821	29.0	4.36%	1506.2	3.23%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e-1	-2.713e+00	0.4821	7.0	1.05%	247.4	0.53%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e-1	-2.672e+00	0.4837	18.0	2.71%	856.3	1.84%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e-1	-2.532e+00	0.5460	5.0	0.75%	159.0	0.34%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e-1	-2.531e+00	0.5460	12.0	1.80%	528.2	1.13%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e-1	-2.466e+00	0.5623	10.0	1.50%	423.1	0.91%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e-1	-2.425e+00	0.5754	26.0	3.91%	1370.0	2.94%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e-1	-2.404e+00	0.5769	11.0	1.65%	484.8	1.04%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e-1	-2.374e+00	0.5844	10.0	1.50%	431.9	0.93%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e-1	-2.372e+00	0.5844	39.0	5.86%	2189.3	4.69%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-1	-2.350e+00	0.5844	46.0	6.92%	2639.9	5.66%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-1	-2.327e+00	0.5844	33.0	4.96%	1820.7	3.90%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-2.257e+00	0.6147	3.0	0.45%	79.1	0.17%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-2.232e+00	0.6200	27.0	4.06%	1463.1	3.14%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-2.029e+00	0.7477	24.0	3.61%	1312.3	2.81%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-1.998e+00	0.7596	2.0	0.30%	45.7	0.10%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-1.994e+00	0.7596	29.0	4.36%	1633.9	3.50%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-1.990e+00	0.7596	18.0	2.71%	947.9	2.03%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-1.973e+00	0.7596	7.0	1.05%	299.3	0.64%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-1.961e+00	0.7596	7.0	1.05%	300.2	0.64%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-1.952e+00	0.7596	3.0	0.45%	91.2	0.20%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-1.918e+00	0.7596	70.0	10.53%	4325.4	9.27%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-1.918e+00	0.7596	28.0	4.21%	1585.7	3.40%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-1.900e+00	0.7596	4.0	0.60%	143.9	0.31%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-1.840e+00	0.7814	46.0	6.92%	2766.4	5.93%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-1.833e+00	0.7814	5.0	0.75%	200.5	0.43%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-1.832e+00	0.7814	6.0	0.90%	255.3	0.55%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-1.799e+00	0.7819	40.0	6.02%	2385.4	5.11%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-1.794e+00	0.7819	16.0	2.41%	854.1	1.83%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-1.783e+00	0.7819	15.0	2.26%	794.5	1.70%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-1.777e+00	0.7819	1.0	0.15%	14.0	0.03%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-1.775e+00	0.7819	38.0	5.71%	2262.0	4.85%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-1.774e+00	0.7819	19.0	2.86%	1044.1	2.24%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e0	-1.737e+00	0.7819	28.0	4.21%	1623.6	3.48%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-1.732e+00	0.7819	14.0	2.11%	740.4	1.59%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.718e+00	0.7819	3.0	0.45%	102.9	0.22%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-1.709e+00	0.7819	9.0	1.35%	440.3	0.94%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-1.707e+00	0.7819	10.0	1.50%	500.2	1.07%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	-1.698e+00	0.7819	26.0	3.91%	1503.9	3.22%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-1.687e+00	0.7819	4.0	0.60%	156.3	0.33%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-1.671e+00	0.7819	5.0	0.75%	212.7	0.46%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-1.609e+00	0.8007	65.0	9.77%	4098.8	8.78%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-1.569e+00	0.8238	3.0	0.45%	110.9	0.24%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-1.559e+00	0.8238	25.0	3.76%	1469.3	3.15%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-1.556e+00	0.8238	7.0	1.05%	338.3	0.73%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-1.554e+00	0.8238	19.0	2.86%	1084.6	2.32%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-1.528e+00	0.8238	13.0	1.95%	709.6	1.52%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-1.527e+00	0.8238	8.0	1.20%	401.1	0.86%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-1.510e+00	0.8238	8.0	1.20%	403.2	0.86%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-1.479e+00	0.8380	5.0	0.75%	228.9	0.49%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-1.459e+00	0.8463	13.0	1.95%	720.7	1.54%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-1.447e+00	0.8476	32.0	4.81%	1954.4	4.19%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-1.445e+00	0.8476	5.0	0.75%	231.6	0.50%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-1.435e+00	0.8476	26.0	3.91%	1563.5	3.35%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-1.418e+00	0.8476	23.0	3.46%	1371.2	2.94%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-1.405e+00	0.8507	3.0	0.45%	120.2	0.26%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-1.402e+00	0.8507	9.0	1.35%	478.8	1.03%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-1.400e+00	0.8507	22.0	3.31%	1310.9	2.81%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-1.390e+00	0.8507	10.0	1.50%	542.2	1.16%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-1.375e+00	0.8507	2.0	0.30%	68.8	0.15%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	-1.375e+00	0.8507	3.0	0.45%	122.8	0.26%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-1.374e+00	0.8507	17.0	2.56%	991.8	2.13%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-1.344e+00	0.8507	25.0	3.76%	1520.4	3.26%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-1.312e+00	0.8674	19.0	2.86%	1135.0	2.43%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-1.309e+00	0.8674	14.0	2.11%	810.9	1.74%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-1.280e+00	0.8802	4.0	0.60%	187.3	0.40%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-1.278e+00	0.8802	12.0	1.80%	687.7	1.47%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-1.230e+00	0.9093	51.0	7.67%	3297.2	7.07%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-1.229e+00	0.9093	31.0	4.66%	1950.7	4.18%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-1.199e+00	0.9220	23.0	3.46%	1425.2	3.05%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-1.194e+00	0.9220	28.0	4.21%	1760.8	3.77%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-1.172e+00	0.9317	1.0	0.15%	26.8	0.06%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-1.171e+00	0.9317	58.0	8.72%	3797.7	8.14%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-1.169e+00	0.9317	21.0	3.16%	1300.8	2.79%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-1.153e+00	0.9317	63.0	9.47%	4146.3	8.89%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	-1.145e+00	0.9317	3.0	0.45%	139.6	0.30%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-1.144e+00	0.9317	28.0	4.21%	1775.2	3.80%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	-1.132e+00	0.9317	20.0	3.01%	1243.3	2.66%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-1.129e+00	0.9317	19.0	2.86%	1177.0	2.52%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e0	-1.117e+00	0.9317	9.0	1.35%	522.0	1.12%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-1.105e+00	0.9317	2.0	0.30%	83.4	0.18%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-1.102e+00	0.9317	11.0	1.65%	654.2	1.40%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-1.095e+00	0.9317	13.0	1.95%	787.2	1.69%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-1.067e+00	0.9414	68.0	10.23%	4529.7	9.71%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	-1.043e+00	0.9568	37.0	5.56%	2418.6	5.18%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-1.042e+00	0.9568	51.0	7.67%	3375.8	7.23%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-1.038e+00	0.9568	145.0	21.80%	9868.8	21.15%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-1.037e+00	0.9568	85.0	12.78%	5715.1	12.25%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-1.036e+00	0.9568	9.0	1.35%	535.9	1.15%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-1.033e+00	0.9568	22.0	3.31%	1404.1	3.01%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-1.014e+00	0.9568	10.0	1.50%	605.1	1.30%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-9.791e-01	0.9698	32.0	4.81%	2101.5	4.50%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-9.788e-01	0.9698	25.0	3.76%	1624.1	3.48%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-9.690e-01	0.9698	18.0	2.71%	1152.2	2.47%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-9.663e-01	0.9698	5.0	0.75%	284.8	0.61%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-9.632e-01	0.9698	12.0	1.80%	749.7	1.61%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-9.598e-01	0.9698	53.0	7.97%	3550.9	7.61%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-9.500e-01	0.9698	82.0	12.33%	5558.8	11.91%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-9.482e-01	0.9698	3.0	0.45%	157.5	0.34%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-9.482e-01	0.9698	3.0	0.45%	157.5	0.34%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-9.428e-01	0.9698	4.0	0.60%	222.3	0.48%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-9.273e-01	0.9698	40.0	6.02%	2670.8	5.72%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-9.266e-01	0.9698	4.0	0.60%	224.6	0.48%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-9.209e-01	0.9698	21.0	3.16%	1370.1	2.94%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-9.112e-01	0.9698	6.0	0.90%	358.6	0.77%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-9.100e-01	0.9698	129.0	19.40%	8848.8	18.96%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-9.097e-01	0.9698	3.0	0.45%	162.0	0.35%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-9.081e-01	0.9698	21.0	3.16%	1374.1	2.94%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-9.018e-01	0.9698	21.0	3.16%	1376.3	2.95%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-9.003e-01	0.9698	3.0	0.45%	162.3	0.35%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-8.994e-01	0.9698	43.0	6.47%	2889.5	6.19%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-8.985e-01	0.9698	2.0	0.30%	98.9	0.21%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	-8.917e-01	0.9698	1.0	0.15%	37.1	0.08%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-8.883e-01	0.9698	42.0	6.32%	2825.1	6.05%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-8.803e-01	0.9698	31.0	4.66%	2070.2	4.44%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	-8.716e-01	0.9698	1.0	0.15%	38.2	0.08%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-8.431e-01	0.9698	32.0	4.81%	2154.1	4.62%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-8.376e-01	0.9698	3.0	0.45%	169.1	0.36%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-8.375e-01	0.9698	9.0	1.35%	574.3	1.23%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-8.349e-01	0.9698	13.0	1.95%	848.4	1.82%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e0	-8.311e-01	0.9698	150.0	22.56%	10374.6	22.23%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-8.206e-01	0.9698	3.0	0.45%	171.4	0.37%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-8.008e-01	0.9698	23.0	3.46%	1548.1	3.32%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-7.911e-01	0.9698	21.0	3.16%	1413.0	3.03%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-7.876e-01	0.9698	3.0	0.45%	175.6	0.38%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-7.875e-01	0.9698	26.0	3.91%	1761.4	3.77%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-7.834e-01	0.9698	47.0	7.07%	3223.3	6.91%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-7.785e-01	0.9698	27.0	4.06%	1834.1	3.93%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-7.690e-01	0.9698	5.0	0.75%	315.0	0.68%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-7.495e-01	0.9698	38.0	5.71%	2613.7	5.60%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-7.484e-01	0.9698	11.0	1.65%	733.3	1.57%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-7.394e-01	0.9698	17.0	2.56%	1153.8	2.47%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-7.330e-01	0.9698	7.0	1.05%	459.5	0.98%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-7.313e-01	0.9698	16.0	2.41%	1086.9	2.33%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-7.159e-01	0.9698	6.0	0.90%	393.9	0.84%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-7.109e-01	0.9698	13.0	1.95%	883.6	1.89%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-7.092e-01	0.9698	127.0	19.10%	8869.3	19.01%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-7.085e-01	0.9698	48.0	7.22%	3334.3	7.15%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-7.046e-01	0.9698	10.0	1.50%	675.6	1.45%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	-6.737e-01	0.9819	1.0	0.15%	50.1	0.11%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-6.729e-01	0.9819	2.0	0.30%	120.3	0.26%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-6.606e-01	0.9844	41.0	6.17%	2870.4	6.15%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-6.560e-01	0.9844	11.0	1.65%	759.7	1.63%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-6.558e-01	0.9844	29.0	4.36%	2028.6	4.35%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-6.518e-01	0.9844	76.0	11.43%	5337.6	11.44%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-6.366e-01	0.9876	80.0	12.03%	5630.3	12.07%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-6.200e-01	0.9990	31.0	4.66%	2187.4	4.69%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-6.177e-01	0.9990	8.0	1.20%	557.6	1.20%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-6.064e-01	1.0000	14.0	2.11%	988.7	2.12%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-5.937e-01	1.0000	72.0	10.83%	5100.6	10.93%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-5.906e-01	1.0000	91.0	13.68%	6443.7	13.81%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-5.843e-01	1.0000	9.0	1.35%	638.4	1.37%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-5.804e-01	1.0000	4.0	0.60%	278.1	0.60%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-5.722e-01	1.0000	47.0	7.07%	3348.5	7.18%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-5.670e-01	1.0000	28.0	4.21%	2002.2	4.29%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-5.630e-01	1.0000	17.0	2.56%	1219.4	2.61%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-5.565e-01	1.0000	56.0	8.42%	3997.1	8.57%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-5.552e-01	1.0000	7.0	1.05%	502.8	1.08%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-5.335e-01	1.0000	67.0	10.08%	4795.1	10.28%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-5.248e-01	1.0000	43.0	6.47%	3097.0	6.64%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-5.234e-01	1.0000	7.0	1.05%	511.4	1.10%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-5.229e-01	1.0000	1.0	0.15%	63.1	0.14%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-5.152e-01	1.0000	5.0	0.75%	366.7	0.79%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-5.152e-01	1.0000	5.0	0.75%	366.5	0.79%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	-5.082e-01	1.0000	30.0	4.51%	2178.7	4.67%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-5.018e-01	1.0000	13.0	1.95%	956.3	2.05%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-5.017e-01	1.0000	33.0	4.96%	2397.9	5.14%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-4.927e-01	1.0000	165.0	24.81%	11769.5	25.22%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-4.923e-01	1.0000	11.0	1.65%	814.8	1.75%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-4.788e-01	1.0000	2.0	0.30%	147.9	0.32%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-4.788e-01	1.0000	2.0	0.30%	147.9	0.32%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-4.709e-01	1.0000	30.0	4.51%	2201.7	4.72%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-4.644e-01	1.0000	16.0	2.41%	1191.7	2.55%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-4.626e-01	1.0000	10.0	1.50%	753.0	1.61%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-4.472e-01	1.0000	26.0	3.91%	1927.3	4.13%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-4.445e-01	1.0000	2.0	0.30%	153.9	0.33%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-4.288e-01	1.0000	7.0	1.05%	541.1	1.16%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-4.288e-01	1.0000	7.0	1.05%	541.8	1.16%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-4.277e-01	1.0000	1.0	0.15%	74.8	0.16%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-4.231e-01	1.0000	2.0	0.30%	157.5	0.34%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-4.199e-01	1.0000	38.0	5.71%	2814.4	6.03%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-4.128e-01	1.0000	1.0	0.15%	76.5	0.16%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-4.110e-01	1.0000	9.0	1.35%	698.5	1.50%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-4.056e-01	1.0000	1.0	0.15%	77.4	0.17%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-3.965e-01	1.0000	9.0	1.35%	704.3	1.51%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-3.940e-01	1.0000	12.0	1.80%	930.1	1.99%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-3.878e-01	1.0000	12.0	1.80%	933.2	2.00%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-3.838e-01	1.0000	23.0	3.46%	1749.6	3.75%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-3.751e-01	1.0000	4.0	0.60%	328.1	0.70%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-3.698e-01	1.0000	2.0	0.30%	168.0	0.36%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-3.684e-01	1.0000	24.0	3.61%	1833.9	3.93%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-3.662e-01	1.0000	52.0	7.82%	3873.2	8.30%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-3.617e-01	1.0000	3.0	0.45%	252.8	0.54%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-3.571e-01	1.0000	24.0	3.61%	1841.5	3.95%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-3.487e-01	1.0000	12.0	1.80%	953.2	2.04%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-3.408e-01	1.0000	6.0	0.90%	497.0	1.07%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-3.382e-01	1.0000	28.0	4.21%	2150.9	4.61%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-3.367e-01	1.0000	8.0	1.20%	654.5	1.40%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-3.336e-01	1.0000	67.0	10.08%	4992.9	10.70%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-3.334e-01	1.0000	6.0	0.90%	500.5	1.07%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-3.285e-01	1.0000	5.0	0.75%	423.3	0.91%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-3.270e-01	1.0000	3.0	0.45%	262.8	0.56%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-3.199e-01	1.0000	4.0	0.60%	346.1	0.74%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-3.189e-01	1.0000	26.0	3.91%	2018.4	4.33%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-3.189e-01	1.0000	42.0	6.32%	3194.2	6.85%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-3.182e-01	1.0000	62.0	9.32%	4649.2	9.96%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-3.142e-01	1.0000	6.0	0.90%	508.9	1.09%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-3.135e-01	1.0000	72.0	10.83%	5378.0	11.53%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-3.028e-01	1.0000	7.0	1.05%	593.0	1.27%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-3.003e-01	1.0000	13.0	1.95%	1057.6	2.27%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-2.912e-01	1.0000	5.0	0.75%	438.5	0.94%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-2.849e-01	1.0000	28.0	4.21%	2196.0	4.71%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-2.793e-01	1.0000	55.0	8.27%	4188.8	8.98%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-2.743e-01	1.0000	28.0	4.21%	2206.5	4.73%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-2.729e-01	1.0000	5.0	0.75%	446.8	0.96%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-2.610e-01	1.0000	12.0	1.80%	1006.9	2.16%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-2.603e-01	1.0000	21.0	3.16%	1694.2	3.63%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-2.572e-01	1.0000	1.0	0.15%	104.1	0.22%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-2.549e-01	1.0000	37.0	5.56%	2896.0	6.21%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-2.540e-01	1.0000	2.0	0.30%	199.7	0.43%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-2.489e-01	1.0000	1.0	0.15%	106.2	0.23%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-2.472e-01	1.0000	26.0	3.91%	2084.0	4.47%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-2.447e-01	1.0000	4.0	0.60%	376.8	0.81%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-2.435e-01	1.0000	5.0	0.75%	460.7	0.99%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e0	-2.309e-01	1.0000	42.0	6.32%	3295.9	7.06%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-2.189e-01	1.0000	6.0	0.90%	556.7	1.19%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-2.186e-01	1.0000	14.0	2.11%	1195.0	2.56%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-2.175e-01	1.0000	24.0	3.61%	1963.3	4.21%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-2.112e-01	1.0000	106.0	15.94%	8002.3	17.15%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-1.931e-01	1.0000	12.0	1.80%	1059.6	2.27%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-1.765e-01	1.0000	4.0	0.60%	412.3	0.88%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-1.727e-01	1.0000	1.0	0.15%	129.1	0.28%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-1.727e-01	1.0000	35.0	5.26%	2854.0	6.12%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-1.721e-01	1.0000	35.0	5.26%	2855.7	6.12%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-1.712e-01	1.0000	9.0	1.35%	837.1	1.79%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-1.690e-01	1.0000	5.0	0.75%	504.3	1.08%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-1.649e-01	1.0000	1.0	0.15%	132.6	0.28%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-1.629e-01	1.0000	2.0	0.30%	236.7	0.51%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-1.417e-01	1.0000	38.0	5.71%	3134.4	6.72%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.397e-01	1.0000	18.0	2.71%	1594.8	3.42%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-1.388e-01	1.0000	3.0	0.45%	346.2	0.74%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-1.379e-01	1.0000	93.0	13.98%	7229.7	15.49%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-1.376e-01	1.0000	4.0	0.60%	439.2	0.94%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-1.370e-01	1.0000	1.0	0.15%	144.8	0.31%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-1.307e-01	1.0000	14.0	2.11%	1287.3	2.76%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-1.277e-01	1.0000	5.0	0.75%	537.8	1.15%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-1.251e-01	1.0000	3.0	0.45%	356.1	0.76%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-1.230e-01	1.0000	4.0	0.60%	451.2	0.97%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-1.206e-01	1.0000	19.0	2.86%	1702.3	3.65%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-1.198e-01	1.0000	48.0	7.22%	3937.8	8.44%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-1.196e-01	1.0000	4.0	0.60%	454.5	0.97%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-1.151e-01	1.0000	5.0	0.75%	549.2	1.18%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-1.141e-01	1.0000	5.0	0.75%	550.7	1.18%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-1.116e-01	1.0000	43.0	6.47%	3578.7	7.67%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-1.101e-01	1.0000	29.0	4.36%	2506.6	5.37%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-1.039e-01	1.0000	12.0	1.80%	1162.7	2.49%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-1.019e-01	1.0000	12.0	1.80%	1165.7	2.50%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-1.016e-01	1.0000	18.0	2.71%	1655.2	3.55%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-9.933e-02	1.0000	8.0	1.20%	831.9	1.78%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-9.908e-02	1.0000	10.0	1.50%	1002.5	2.15%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-9.811e-02	1.0000	4.0	0.60%	475.1	1.02%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-9.667e-02	1.0000	1.0	0.15%	167.9	0.36%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-9.381e-02	1.0000	1.0	0.15%	169.9	0.36%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-9.287e-02	1.0000	38.0	5.71%	3243.0	6.95%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-8.837e-02	1.0000	13.0	1.95%	1271.4	2.72%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-8.228e-02	1.0000	19.0	2.86%	1775.7	3.81%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-8.120e-02	1.0000	30.0	4.51%	2653.9	5.69%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-7.727e-02	1.0000	23.0	3.46%	2109.9	4.52%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-7.707e-02	1.0000	13.0	1.95%	1293.5	2.77%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-7.121e-02	1.0000	21.0	3.16%	1964.6	4.21%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-6.681e-02	1.0000	8.0	1.20%	884.3	1.90%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-6.586e-02	1.0000	3.0	0.45%	417.3	0.89%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-6.456e-02	1.0000	13.0	1.95%	1321.4	2.83%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-6.118e-02	1.0000	18.0	2.71%	1748.0	3.75%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-5.714e-02	1.0000	7.0	1.05%	814.2	1.74%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-5.556e-02	1.0000	51.0	7.67%	4375.6	9.38%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-4.695e-02	1.0000	77.0	11.58%	6401.2	13.72%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-4.692e-02	1.0000	41.0	6.17%	3641.9	7.81%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-4.027e-02	1.0000	5.0	0.75%	666.8	1.43%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-3.871e-02	1.0000	2.0	0.30%	355.1	0.76%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-3.755e-02	1.0000	15.0	2.26%	1576.7	3.38%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-3.214e-02	1.0000	6.0	0.90%	788.8	1.69%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-2.993e-02	1.0000	2.0	0.30%	376.2	0.81%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-2.978e-02	1.0000	14.0	2.11%	1525.7	3.27%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-2.977e-02	1.0000	28.0	4.21%	2700.5	5.79%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-2.100e-02	1.0000	37.0	5.56%	3499.3	7.50%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-2.017e-02	1.0000	2.0	0.30%	408.1	0.87%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-1.803e-02	1.0000	19.0	2.86%	2035.4	4.36%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-1.483e-02	1.0000	15.0	2.26%	1715.7	3.68%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-1.259e-02	1.0000	5.0	0.75%	787.6	1.69%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-7.225e-03	1.0000	2.0	0.30%	490.2	1.05%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-6.121e-03	1.0000	3.0	0.45%	630.3	1.35%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-4.292e-03	1.0000	29.0	4.36%	3125.8	6.70%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-4.080e-03	1.0000	21.0	3.16%	2436.3	5.22%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-1.079e-03	1.0000	18.0	2.71%	2345.4	5.03%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	19.7	0.04%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	0.000e+00	1.0000	0.0	0.00%	102.0	0.22%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	20.0	0.04%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	0.000e+00	1.0000	0.0	0.00%	90.1	0.19%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	62.5	0.13%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	0.000e+00	1.0000	0.0	0.00%	96.7	0.21%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	33.6	0.07%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	73.2	0.16%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	71.8	0.15%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	49.1	0.11%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	4.5	0.01%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	31.8	0.07%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	25.5	0.05%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	0.000e+00	1.0000	0.0	0.00%	168.3	0.36%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	0.000e+00	1.0000	0.0	0.00%	169.4	0.36%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	0.000e+00	1.0000	0.0	0.00%	24.1	0.05%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	3.5	0.01%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	7.8	0.02%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	0.000e+00	1.0000	0.0	0.00%	41.3	0.09%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	9.5	0.02%