Information for 20-AAAAACAATCCCTCTC (Motif 24)

G T C A C G T A C G T A C T G A C G T A G T A C C G T A C G T A A G C T A G T C A G T C T A G C A C G T A T G C C G A T A G T C
Reverse Opposite:
T A C G C G T A A T C G C G T A A T C G C T A G C T A G C T G A C G A T A C G T A C T G A C G T G A C T A C G T A C G T A C G T
p-value:1e-7
log p-value:-1.807e+01
Information Content per bp:1.758
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.6 +/- 31.1bp
Average Position of motif in Background67.8 +/- 8.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRY/MA0084.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAAAACAATCCCTCTC
GTAAACAAT-------
 G T C A C G T A C G T A C T G A C G T A G T A C C G T A C G T A A G C T A G T C A G T C T A G C A C G T A T G C C G A T A G T C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAAAACAATCCCTCTC
--NAACAAT-------
 G T C A C G T A C G T A C T G A C G T A G T A C C G T A C G T A A G C T A G T C A G T C T A G C A C G T A T G C C G A T A G T C
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAAAACAATCCCTCTC
AAACAAACATTC------
 A C G T A C G T G T C A C G T A C G T A C T G A C G T A G T A C C G T A C G T A A G C T A G T C A G T C T A G C A C G T A T G C C G A T A G T C
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAAAACAATCCCTCTC
GATAATTAATCCCTCTT
 A C G T G T C A C G T A C G T A C T G A C G T A G T A C C G T A C G T A A G C T A G T C A G T C T A G C A C G T A T G C C G A T A G T C
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

PB0066.1_Sox17_1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAAAACAATCCCTCTC
ATAAACAATTAAACA-
 G T C A C G T A C G T A C T G A C G T A G T A C C G T A C G T A A G C T A G T C A G T C T A G C A C G T A T G C C G A T A G T C
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAAAACAATCCCTCTC
TNNAGAACAATANATNN-
 A C G T A C G T G T C A C G T A C G T A C T G A C G T A G T A C C G T A C G T A A G C T A G T C A G T C T A G C A C G T A T G C C G A T A G T C
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AAAAACAATCCCTCTC--
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T G T C A C G T A C G T A C T G A C G T A G T A C C G T A C G T A A G C T A G T C A G T C T A G C A C G T A T G C C G A T A G T C A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAAAACAATCCCTCTC
AATAAACAATN------
 A C G T G T C A C G T A C G T A C T G A C G T A G T A C C G T A C G T A A G C T A G T C A G T C T A G C A C G T A T G C C G A T A G T C
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AAAAACAATCCCTCTC
TNCNNAACAATTTTTNC-
 A C G T A C G T G T C A C G T A C G T A C T G A C G T A G T A C C G T A C G T A A G C T A G T C A G T C T A G C A C G T A T G C C G A T A G T C
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AAAAACAATCCCTCTC
---AACAAT-------
 G T C A C G T A C G T A C T G A C G T A G T A C C G T A C G T A A G C T A G T C A G T C T A G C A C G T A T G C C G A T A G T C
A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T