Information for 16-TCCAGTCCAGYCTCAG (Motif 18)

A G C T T A G C A G T C C T G A A C T G G A C T A T G C T A G C C G T A A C T G A G T C G T A C A G C T A G T C G T C A A C T G
Reverse Opposite:
T A G C A C G T C T A G C T G A A C T G C T A G A G T C C G A T A C T G A T C G C G T A G T A C A G C T A C T G A T C G C T G A
p-value:1e-9
log p-value:-2.261e+01
Information Content per bp:1.729
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.6 +/- 22.3bp
Average Position of motif in Background42.2 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TCCAGTCCAGYCTCAG
TCCCAGMCRAGCCCC--
 A C G T A G C T T A G C A G T C C T G A A C T G G A C T A T G C T A G C C G T A A C T G A G T C G T A C A G C T A G T C G T C A A C T G
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TCCAGTCCAGYCTCAG-
-GCAGCCAAGCGTGACN
 A G C T T A G C A G T C C T G A A C T G G A C T A T G C T A G C C G T A A C T G A G T C G T A C A G C T A G T C G T C A A C T G A C G T
A C G T A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TCCAGTCCAGYCTCAG
-SCAGYCADGCATGAC
 A G C T T A G C A G T C C T G A A C T G G A C T A T G C T A G C C G T A A C T G A G T C G T A C A G C T A G T C G T C A A C T G
A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TCCAGTCCAGYCTCAG
-CCAGACRSVB-----
 A G C T T A G C A G T C C T G A A C T G G A C T A T G C T A G C C G T A A C T G A G T C G T A C A G C T A G T C G T C A A C T G
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:5
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TCCAGTCCAGYCTCAG
-RCATTCCWGG-----
 A G C T T A G C A G T C C T G A A C T G G A C T A T G C T A G C C G T A A C T G A G T C G T A C A G C T A G T C G T C A A C T G
A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TCCAGTCCAGYCTCAG
-CCAGACAG-------
 A G C T T A G C A G T C C T G A A C T G G A C T A T G C T A G C C G T A A C T G A G T C G T A C A G C T A G T C G T C A A C T G
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGTCCAGYCTCAG
ATGCCAGACN--------
 A C G T A C G T A G C T T A G C A G T C C T G A A C T G G A C T A T G C T A G C C G T A A C T G A G T C G T A C A G C T A G T C G T C A A C T G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:TCCAGTCCAGYCTCAG
-BCAGACWA-------
 A G C T T A G C A G T C C T G A A C T G G A C T A T G C T A G C C G T A A C T G A G T C G T A C A G C T A G T C G T C A A C T G
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----TCCAGTCCAGYCTCAG
CAAATCCAGACATCACA---
 A C G T A C G T A C G T A C G T A G C T T A G C A G T C C T G A A C T G G A C T A T G C T A G C C G T A A C T G A G T C G T A C A G C T A G T C G T C A A C T G
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.48
Offset:2
Orientation:forward strand
Alignment:TCCAGTCCAGYCTCAG
--AAGGCAAGTGT---
 A G C T T A G C A G T C C T G A A C T G G A C T A T G C T A G C C G T A A C T G A G T C G T A C A G C T A G T C G T C A A C T G
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T