Information for 11-GGGTGGAAATTGC (Motif 12)

A C T G C T A G A C T G C G A T A C T G A C T G C G T A C T G A C G T A A C G T A C G T A C T G A G T C
Reverse Opposite:
C T A G A G T C C G T A G T C A A C G T A G C T A C G T A G T C A G T C C G T A G T A C A G T C G T A C
p-value:1e-12
log p-value:-2.797e+01
Information Content per bp:1.844
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.3 +/- 19.4bp
Average Position of motif in Background76.8 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.70
Offset:4
Orientation:forward strand
Alignment:GGGTGGAAATTGC-
----GGAAATTCCC
 A C T G C T A G A C T G C G A T A C T G A C T G C G T A C T G A C G T A A C G T A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGGTGGAAATTGC
-AATGGAAAAT--
 A C T G C T A G A C T G C G A T A C T G A C T G C G T A C T G A C G T A A C G T A C G T A C T G A G T C
A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GGGTGGAAATTGC-
----GGAAATTCCC
 A C T G C T A G A C T G C G A T A C T G A C T G C G T A C T G A C G T A A C G T A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGGTGGAAATTGC
-NNTGGAAANN--
 A C T G C T A G A C T G C G A T A C T G A C T G C G T A C T G A C G T A A C G T A C G T A C T G A G T C
A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGGTGGAAATTGC
-AATGGAAAAT--
 A C T G C T A G A C T G C G A T A C T G A C T G C G T A C T G A C G T A A C G T A C G T A C T G A G T C
A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGGTGGAAATTGC
-NATGGAAAAN--
 A C T G C T A G A C T G C G A T A C T G A C T G C G T A C T G A C G T A A C G T A C G T A C T G A G T C
A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGGTGGAAATTGC
---TGGAAAA---
 A C T G C T A G A C T G C G A T A C T G A C T G C G T A C T G A C G T A A C G T A C G T A C T G A G T C
A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGGTGGAAATTGC-
----GGAAANCCCC
 A C T G C T A G A C T G C G A T A C T G A C T G C G T A C T G A C G T A A C G T A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGGTGGAAATTGC----
--GAAAAAATTGCAAGG
 A C T G C T A G A C T G C G A T A C T G A C T G C G T A C T G A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGGTGGAAATTGC
NACAGGAAAT---
 A C T G C T A G A C T G C G A T A C T G A C T G C G T A C T G A C G T A A C G T A C G T A C T G A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T