Information for 6-GRAGACTGCAGACAAC (Motif 7)

C T A G C T A G C G T A C T A G G C T A A G T C C G A T A C T G T G A C C G T A A C T G C G T A G A T C G C T A C T G A G T A C
Reverse Opposite:
C A T G A G C T C G A T C T A G C G A T T A G C A C G T A C T G T A G C C G T A A C T G C G A T G A T C G C A T A G T C G A T C
p-value:1e-13
log p-value:-3.048e+01
Information Content per bp:1.672
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif21.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.5 +/- 23.0bp
Average Position of motif in Background53.5 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GRAGACTGCAGACAAC
AGAGRRACAGCWGAC---
 A C G T A C G T C T A G C T A G C G T A C T A G G C T A A G T C C G A T A C T G T G A C C G T A A C T G C G T A G A T C G C T A C T G A G T A C
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GRAGACTGCAGACAAC--
---ATTTGCATACAATGG
 C T A G C T A G C G T A C T A G G C T A A G T C C G A T A C T G T G A C C G T A A C T G C G T A G A T C G C T A C T G A G T A C A C G T A C G T
A C G T A C G T A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:GRAGACTGCAGACAAC
-------BCAGACWA-
 C T A G C T A G C G T A C T A G G C T A A G T C C G A T A C T G T G A C C G T A A C T G C G T A G A T C G C T A C T G A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GRAGACTGCAGACAAC
-------CCAGACAG-
 C T A G C T A G C G T A C T A G G C T A A G T C C G A T A C T G T G A C C G T A A C T G C G T A G A T C G C T A C T G A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GRAGACTGCAGACAAC-
-------CCAGACRSVB
 C T A G C T A G C G T A C T A G G C T A A G T C C G A T A C T G T G A C C G T A A C T G C G T A G A T C G C T A C T G A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GRAGACTGCAGACAAC---
--CAAATCCAGACATCACA
 C T A G C T A G C G T A C T A G G C T A A G T C C G A T A C T G T G A C C G T A A C T G C G T A G A T C G C T A C T G A G T A C A C G T A C G T A C G T
A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GRAGACTGCAGACAAC---
---CGAAGCACACAAAATA
 C T A G C T A G C G T A C T A G G C T A A G T C C G A T A C T G T G A C C G T A A C T G C G T A G A T C G C T A C T G A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GRAGACTGCAGACAAC
TGAGTCAGCA------
 C T A G C T A G C G T A C T A G G C T A A G T C C G A T A C T G T G A C C G T A A C T G C G T A G A T C G C T A C T G A G T A C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GRAGACTGCAGACAAC
CTGAGTCAGCAATTT--
 A C G T C T A G C T A G C G T A C T A G G C T A A G T C C G A T A C T G T G A C C G T A A C T G C G T A G A T C G C T A C T G A G T A C
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GRAGACTGCAGACAAC-----
------CTCACACAATGGCGC
 C T A G C T A G C G T A C T A G G C T A A G T C C G A T A C T G T G A C C G T A A C T G C G T A G A T C G C T A C T G A G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C