Information for 5-TTAGCCNAGCACAMAG (Motif 6)

A C G T A C G T C G T A A C T G G T A C G A T C C G T A C G T A C T A G A G T C C G T A T A G C C G T A G T C A C T G A A C T G
Reverse Opposite:
A G T C G A C T A C G T A C G T A T C G A C G T A C T G G A T C C G A T A C G T C T A G A C T G A G T C A C G T C G T A C G T A
p-value:1e-13
log p-value:-3.176e+01
Information Content per bp:1.787
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.8 +/- 27.1bp
Average Position of motif in Background8.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.59
Offset:10
Orientation:reverse strand
Alignment:TTAGCCNAGCACAMAG
----------ACAAAG
 A C G T A C G T C G T A A C T G G T A C G A T C C G T A C G T A C T A G A G T C C G T A T A G C C G T A G T C A C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:TTAGCCNAGCACAMAG-
-------VRRACAAWGG
 A C G T A C G T C G T A A C T G G T A C G A T C C G T A C G T A C T A G A G T C C G T A T A G C C G T A G T C A C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:TTAGCCNAGCACAMAG------
----------ACAAAGGNBCCT
 A C G T A C G T C G T A A C T G G T A C G A T C C G T A C G T A C T A G A G T C C G T A T A G C C G T A G T C A C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:TTAGCCNAGCACAMAG-
-------AAAACAAAGG
 A C G T A C G T C G T A A C T G G T A C G A T C C G T A C G T A C T A G A G T C C G T A T A G C C G T A G T C A C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TTAGCCNAGCACAMAG----
----CGAAGCACACAAAATA
 A C G T A C G T C G T A A C T G G T A C G A T C C G T A C G T A C T A G A G T C C G T A T A G C C G T A G T C A C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:TTAGCCNAGCACAMAG-
-------GGAACAAAGR
 A C G T A C G T C G T A A C T G G T A C G A T C C G T A C G T A C T A G A G T C C G T A T A G C C G T A G T C A C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TTAGCCNAGCACAMAG----
----AAACAGACAAAGGAAT
 A C G T A C G T C G T A A C T G G T A C G A T C C G T A C G T A C T A G A G T C C G T A T A G C C G T A G T C A C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TTAGCCNAGCACAMAG-----
----AGAAGAACAAAGGACTA
 A C G T A C G T C G T A A C T G G T A C G A T C C G T A C G T A C T A G A G T C C G T A T A G C C G T A G T C A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TTAGCCNAGCACAMAG-----
----ATAAGAACAAAGGACTA
 A C G T A C G T C G T A A C T G G T A C G A T C C G T A C G T A C T A G A G T C C G T A T A G C C G T A G T C A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:TTAGCCNAGCACAMAG
----NWAACCACADNN
 A C G T A C G T C G T A A C T G G T A C G A T C C G T A C G T A C T A G A G T C C G T A T A G C C G T A G T C A C T G A A C T G
A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C