Information for 13-RGAGAGGAGG (Motif 46)

T C G A T C A G C T G A A T C G T C G A C T A G T A C G G C T A A C T G T C A G
Reverse Opposite:
A G T C T G A C C G A T A T G C G A T C A G C T T A G C A G C T A G T C A G C T
p-value:1e-3
log p-value:-7.926e+00
Information Content per bp:1.617
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.65%
Number of Background Sequences with motif1181.6
Percentage of Background Sequences with motif2.44%
Average Position of motif in Targets51.3 +/- 28.9bp
Average Position of motif in Background49.3 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gata4/MA0482.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-RGAGAGGAGG
NNGAGATAAGA
 A C G T T C G A T C A G C T G A A T C G T C G A C T A G T A C G G C T A A C T G T C A G
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

Gata1/MA0035.3/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:RGAGAGGAGG-
ANAGATAAGAA
 T C G A T C A G C T G A A T C G T C G A C T A G T A C G G C T A A C T G T C A G A C G T
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:RGAGAGGAGG-
-CAGATAAGGN
 T C G A T C A G C T G A A T C G T C G A C T A G T A C G G C T A A C T G T C A G A C G T
A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:RGAGAGGAGG-
-NAGATAAGNN
 T C G A T C A G C T G A A T C G T C G A C T A G T A C G G C T A A C T G T C A G A C G T
A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:RGAGAGGAGG--
--AGAGGAAGTG
 T C G A T C A G C T G A A T C G T C G A C T A G T A C G G C T A A C T G T C A G A C G T A C G T
A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

GATA3/MA0037.2/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:RGAGAGGAGG
--AGATAAGA
 T C G A T C A G C T G A A T C G T C G A C T A G T A C G G C T A A C T G T C A G
A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

SPIC/MA0687.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--RGAGAGGAGG--
AAAAAGAGGAAGTA
 A C G T A C G T T C G A T C A G C T G A A T C G T C G A C T A G T A C G G C T A A C T G T C A G A C G T A C G T
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:RGAGAGGAGG
NVAGATAAGR
 T C G A T C A G C T G A A T C G T C G A C T A G T A C G G C T A A C T G T C A G
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:RGAGAGGAGG-
-AACAGGAAGT
 T C G A T C A G C T G A A T C G T C G A C T A G T A C G G C T A A C T G T C A G A C G T
A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

SPI1/MA0080.4/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--RGAGAGGAGG--
AAAAAGCGGAAGTA
 A C G T A C G T T C G A T C A G C T G A A T C G T C G A C T A G T A C G G C T A A C T G T C A G A C G T A C G T
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A