Information for 25-TCACGCGTGACGG (Motif 45)

A C G T A G T C T C G A A T G C A T C G A G T C A T C G A C G T A C T G C G T A G A T C T A C G A C T G
Reverse Opposite:
T G A C A G T C C A T G A C G T A G T C G T C A A T G C C T A G A T G C A T C G A C G T A C T G G T C A
p-value:1e-4
log p-value:-1.049e+01
Information Content per bp:1.753
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.3 +/- 30.3bp
Average Position of motif in Background40.0 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX1/MA0779.1/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----TCACGCGTGACGG
NGCANTCATGCGTGACG-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A A T G C A T C G A G T C A T C G A C G T A C T G C G T A G A T C T A C G A C T G
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T

PAX9/MA0781.1/Jaspar

Match Rank:2
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----TCACGCGTGACGG
TGCAGTCATGCGTGACG-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A A T G C A T C G A G T C A T C G A C G T A C T G C G T A G A T C T A C G A C T G
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T

Mitf/MA0620.1/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TCACGCGTGACGG
--NCACGTGACN-
 A C G T A G T C T C G A A T G C A T C G A G T C A T C G A C G T A C T G C G T A G A T C T A C G A C T G
A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T

Pax2/MA0067.1/Jaspar

Match Rank:4
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TCACGCGTGACGG
----NCGTGACN-
 A C G T A G T C T C G A A T G C A T C G A G T C A T C G A C G T A C T G C G T A G A T C T A C G A C T G
A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

Pax6/MA0069.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TCACGCGTGACGG
TTCACGCATGAGTT
 A C G T A C G T A G T C T C G A A T G C A T C G A G T C A T C G A C G T A C T G C G T A G A T C T A C G A C T G
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TCACGCGTGACGG
--AGGTGTGA---
 A C G T A G T C T C G A A T G C A T C G A G T C A T C G A C G T A C T G C G T A G A T C T A C G A C T G
A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TCACGCGTGACGG
--NCACGTGACN-
 A C G T A G T C T C G A A T G C A T C G A G T C A T C G A C G T A C T G C G T A G A T C T A C G A C T G
A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TCACGCGTGACGG
--AGGTGTGA---
 A C G T A G T C T C G A A T G C A T C G A G T C A T C G A C G T A C T G C G T A G A T C T A C G A C T G
A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T

GFX(?)/Promoter/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCACGCGTGACGG
ATTCTCGCGAGA---
 A C G T A C G T A C G T A G T C T C G A A T G C A T C G A G T C A T C G A C G T A C T G C G T A G A T C T A C G A C T G
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TCACGCGTGACGG
---TGCGTG----
 A C G T A G T C T C G A A T G C A T C G A G T C A T C G A C G T A C T G C G T A G A T C T A C G A C T G
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T