Information for 20-TCCCTGCGCCGCAGGG (Motif 43)

A G C T A G T C A G T C A T G C C A G T A T C G A T G C C T A G A T G C A G T C A T C G A T G C G T C A C T A G A C T G C T A G
Reverse Opposite:
A G T C T A G C A G T C A C G T A T C G A T G C T C A G A T C G G A T C A T C G T A G C G T C A T A C G A C T G A C T G T C G A
p-value:1e-7
log p-value:-1.720e+01
Information Content per bp:1.687
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.3 +/- 16.9bp
Average Position of motif in Background56.6 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TCCCTGCGCCGCAGGG----
-----DCHCAGCAGGRGGCC
 A G C T A G T C A G T C A T G C C A G T A T C G A T G C C T A G A T G C A G T C A T C G A T G C G T C A C T A G A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TCCCTGCGCCGCAGGG--
------CACAGCAGGGGG
 A G C T A G T C A G T C A T G C C A G T A T C G A T G C C T A G A T G C A G T C A T C G A T G C G T C A C T A G A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:TCCCTGCGCCGCAGGG---
-------GCCTCAGGGCAT
 A G C T A G T C A G T C A T G C C A G T A T C G A T G C C T A G A T G C A G T C A T C G A T G C G T C A C T A G A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TCCCTGCGCCGCAGGG----
-----NCGCAGCGGGGGGTC
 A G C T A G T C A G T C A T G C C A G T A T C G A T G C C T A G A T G C A G T C A T C G A T G C G T C A C T A G A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:TCCCTGCGCCGCAGGG--
------TGCCCNGGGGCA
 A G C T A G T C A G T C A T G C C A G T A T C G A T G C C T A G A T G C A G T C A T C G A T G C G T C A C T A G A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:6
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TCCCTGCGCCGCAGGG---
----NTCCCCTCAGGGANT
 A G C T A G T C A G T C A T G C C A G T A T C G A T G C C T A G A T G C A G T C A T C G A T G C G T C A C T A G A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TCCCTGCGCCGCAGGG
NNGCNCTGCGCGGC----
 A C G T A C G T A G C T A G T C A G T C A T G C C A G T A T C G A T G C C T A G A T G C A G T C A T C G A T G C G T C A C T A G A C T G C T A G
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TCCCTGCGCCGCAGGG---
----NTCGCCTCAGGCAAT
 A G C T A G T C A G T C A T G C C A G T A T C G A T G C C T A G A T G C A G T C A T C G A T G C G T C A C T A G A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:forward strand
Alignment:TCCCTGCGCCGCAGGG---
-----TTGCCCTAGGGCAT
 A G C T A G T C A G T C A T G C C A G T A T C G A T G C C T A G A T G C A G T C A T C G A T G C G T C A C T A G A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.49
Offset:6
Orientation:forward strand
Alignment:TCCCTGCGCCGCAGGG--
------GTCCCCAGGGGA
 A G C T A G T C A G T C A T G C C A G T A T C G A T G C C T A G A T G C A G T C A T C G A T G C G T C A C T A G A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A