Information for 21-TCATGCTAAGTTG (Motif 37)

C G A T A G T C C G T A C G A T A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C T G
Reverse Opposite:
A G T C G T C A G T C A A G T C C G A T A C G T C G T A C T A G A G T C C G T A A C G T A C T G C G T A
p-value:1e-8
log p-value:-2.030e+01
Information Content per bp:1.910
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.6 +/- 15.1bp
Average Position of motif in Background20.7 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCATGCTAAGTTG
-TATGCWAATBAV
 C G A T A G T C C G T A C G A T A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C T G
A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCATGCTAAGTTG
TNTCCTGCTGTGNNG
 A C G T A C G T C G A T A G T C C G T A C G A T A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCATGCTAAGTTG
TCNCCTGCTGNGNNN
 A C G T A C G T C G A T A G T C C G T A C G A T A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

POU3F3/MA0788.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCATGCTAAGTTG
ATTATGCTAATTT-
 A C G T C G A T A G T C C G T A C G A T A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C T G
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCATGCTAAGTTG
NNTCCTGCTGTGNNN
 A C G T A C G T C G A T A G T C C G T A C G A T A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C T G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TCATGCTAAGTTG-
-----TTAAGTGGT
 C G A T A G T C C G T A C G A T A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCATGCTAAGTTG-
NGTCACGCTTGGCTGC
 A C G T A C G T C G A T A G T C C G T A C G A T A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C T G A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCATGCTAAGTTG
-WATGCAAATGAG
 C G A T A G T C C G T A C G A T A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C T G
A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TCATGCTAAGTTG-
-----TTAAGTGGN
 C G A T A G T C C G T A C G A T A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCATGCTAAGTTG
TTATGCAAATTA-
 C G A T A G T C C G T A C G A T A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C T G
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T