Information for 14-CTTCCCAKGACAVTGA (Motif 29)

G T A C A C G T C G A T A T G C A G T C A T G C G C T A C A T G C T A G T C G A G T A C G T C A T C A G C G A T A C T G G T C A
Reverse Opposite:
A C G T A G T C C G T A A G C T A C G T A C T G A G C T A G T C G T A C C A G T A T C G C T A G A T C G C G T A G T C A A C T G
p-value:1e-9
log p-value:-2.232e+01
Information Content per bp:1.733
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 18.1bp
Average Position of motif in Background58.1 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:CTTCCCAKGACAVTGA-
--------GACAATGNN
 G T A C A C G T C G A T A T G C A G T C A T G C G C T A C A T G C T A G T C G A G T A C G T C A T C A G C G A T A C T G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Sox6/MA0515.1/Jaspar

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CTTCCCAKGACAVTGA
------AAAACAATGG
 G T A C A C G T C G A T A T G C A G T C A T G C G C T A C A T G C T A G T C G A G T A C G T C A T C A G C G A T A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

EBF1/MA0154.3/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTTCCCAKGACAVTGA
ANTCCCTNGGGAAT--
 G T A C A C G T C G A T A T G C A G T C A T G C G C T A C A T G C T A G T C G A G T A C G T C A T C A G C G A T A C T G G T C A
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CTTCCCAKGACAVTGA
------VRRACAAWGG
 G T A C A C G T C G A T A T G C A G T C A T G C G C T A C A T G C T A G T C G A G T A C G T C A T C A G C G A T A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:CTTCCCAKGACAVTGA
---------ACAAAG-
 G T A C A C G T C G A T A T G C A G T C A T G C G C T A C A T G C T A G T C G A G T A C G T C A T C A G C G A T A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTTCCCAKGACAVTGA
HTTTCCCASG-------
 A C G T G T A C A C G T C G A T A T G C A G T C A T G C G C T A C A T G C T A G T C G A G T A C G T C A T C A G C G A T A C T G G T C A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CTTCCCAKGACAVTGA
------VRAACAATGG
 G T A C A C G T C G A T A T G C A G T C A T G C G C T A C A T G C T A G T C G A G T A C G T C A T C A G C G A T A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

POL002.1_INR/Jaspar

Match Rank:8
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:CTTCCCAKGACAVTGA
--------NNNANTGA
 G T A C A C G T C G A T A T G C A G T C A T G C G C T A C A T G C T A G T C G A G T A C G T C A T C A G C G A T A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CTTCCCAKGACAVTGA-
-------RAACAATGGN
 G T A C A C G T C G A T A T G C A G T C A T G C G C T A C A T G C T A G T C G A G T A C G T C A T C A G C G A T A C T G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTTCCCAKGACAVTGA
ATTTGCATAACAATG-
 G T A C A C G T C G A T A T G C A G T C A T G C G C T A C A T G C T A G T C G A G T A C G T C A T C A G C G A T A C T G G T C A
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G A C G T