Information for 17-KCTSMBHACAWAA (Motif 27)

A C G T T A G C A C G T A T C G G T C A A G T C G A C T T C G A A T G C C G T A G C T A G T C A C G T A
Reverse Opposite:
G C A T A C G T C G A T C G A T A T C G A G C T C T G A T C A G A C G T A T G C C G T A A T C G G T C A
p-value:1e-9
log p-value:-2.295e+01
Information Content per bp:1.664
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.87%
Number of Background Sequences with motif227.4
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets48.3 +/- 27.5bp
Average Position of motif in Background52.3 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--KCTSMBHACAWAA-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T T A G C A C G T A T C G G T C A A G T C G A C T T C G A A T G C C G T A G C T A G T C A C G T A A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

PB0022.1_Gata5_1/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---KCTSMBHACAWAA-
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T A C G T T A G C A C G T A T C G G T C A A G T C G A C T T C G A A T G C C G T A G C T A G T C A C G T A A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--KCTSMBHACAWAA-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T T A G C A C G T A T C G G T C A A G T C G A C T T C G A A T G C C G T A G C T A G T C A C G T A A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-KCTSMBHACAWAA-
ATGTCACAACAACAC
 A C G T A C G T T A G C A C G T A T C G G T C A A G T C G A C T T C G A A T G C C G T A G C T A G T C A C G T A A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---KCTSMBHACAWAA-
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T T A G C A C G T A T C G G T C A A G T C G A C T T C G A A T G C C G T A G C T A G T C A C G T A A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

GATA3/MA0037.2/Jaspar

Match Rank:6
Score:0.53
Offset:7
Orientation:forward strand
Alignment:KCTSMBHACAWAA--
-------AGATAAGA
 A C G T T A G C A C G T A T C G G T C A A G T C G A C T T C G A A T G C C G T A G C T A G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-KCTSMBHACAWAA
NGCTN---------
 A C G T A C G T T A G C A C G T A T C G G T C A A G T C G A C T T C G A A T G C C G T A G C T A G T C A C G T A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-KCTSMBHACAWAA-
AGATGKDGAGATAAG
 A C G T A C G T T A G C A C G T A T C G G T C A A G T C G A C T T C G A A T G C C G T A G C T A G T C A C G T A A C G T
C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

NFIL3/MA0025.1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:KCTSMBHACAWAA
--ANGTTACATAA
 A C G T T A G C A C G T A T C G G T C A A G T C G A C T T C G A A T G C C G T A G C T A G T C A C G T A
A C G T A C G T C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:KCTSMBHACAWAA
---CCYMATAAAA
 A C G T T A G C A C G T A T C G G T C A A G T C G A C T T C G A A T G C C G T A G C T A G T C A C G T A
A C G T A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A