p-value: | 1e-11 |
log p-value: | -2.762e+01 |
Information Content per bp: | 1.718 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.82% |
Number of Background Sequences with motif | 2.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 56.4 +/- 22.6bp |
Average Position of motif in Background | 55.5 +/- 5.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.6 |
Multiplicity (# of sites on avg that occur together) | 1.17 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0123.1_Obox3/Jaspar
Match Rank: | 1 |
Score: | 0.67 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTTAATCTCCMCACAC ATAGTTAATCCCCCNNA-- |
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PH0121.1_Obox1/Jaspar
Match Rank: | 2 |
Score: | 0.67 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTTAATCTCCMCACAC NTAGTTAATCCCCTTAN-- |
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PH0122.1_Obox2/Jaspar
Match Rank: | 3 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTTAATCTCCMCACAC ATAGTTAATCCCCCTCA-- |
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PH0137.1_Pitx1/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTTAATCTCCMCACAC NTTGTTAATCCCTCTNN-- |
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PH0129.1_Otx1/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GTTAATCTCCMCACAC NNNAATTAATCCCCNCN--- |
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PH0124.1_Obox5_1/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GTTAATCTCCMCACAC NANANTTAATCCCNNNN--- |
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PH0130.1_Otx2/Jaspar
Match Rank: | 7 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GTTAATCTCCMCACAC GANNATTAATCCCTNNN--- |
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Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer
Match Rank: | 8 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTTAATCTCCMCACAC NYTAATCCYB------ |
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OTX2/MA0712.1/Jaspar
Match Rank: | 9 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GTTAATCTCCMCACAC -TTAATCCT------- |
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PH0138.1_Pitx2/Jaspar
Match Rank: | 10 |
Score: | 0.62 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GTTAATCTCCMCACAC GNNNATTAATCCCTNCN--- |
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