Information for 6-CYGTSAATCACAGCCC (Motif 7)

A T G C G A C T A C T G A C G T A T G C G T C A G T C A A C G T A G T C G T C A A T G C G C T A C A T G G T A C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G G A T C C A G T A T C G A C G T A C T G G T C A C A G T A C G T A T C G T G C A T G A C C T G A A T C G
p-value:1e-13
log p-value:-3.071e+01
Information Content per bp:1.697
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif37.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets43.4 +/- 27.2bp
Average Position of motif in Background46.9 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.72
Offset:4
Orientation:forward strand
Alignment:CYGTSAATCACAGCCC
----AAATCACTGC--
 A T G C G A C T A C T G A C G T A T G C G T C A G T C A A C G T A G T C G T C A A T G C G C T A C A T G G T A C A G T C A G T C
A C G T A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.71
Offset:4
Orientation:forward strand
Alignment:CYGTSAATCACAGCCC
----AAATCACAGCA-
 A T G C G A C T A C T G A C G T A T G C G T C A G T C A A C G T A G T C G T C A A T G C G C T A C A T G G T A C A G T C A G T C
A C G T A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CYGTSAATCACAGCCC
NCTGTCAATCAN-----
 A C G T A T G C G A C T A C T G A C G T A T G C G T C A G T C A A C G T A G T C G T C A A T G C G C T A C A T G G T A C A G T C A G T C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CYGTSAATCACAGCCC
---CAAATCACTG---
 A T G C G A C T A C T G A C G T A T G C G T C A G T C A A C G T A G T C G T C A A T G C G C T A C A T G G T A C A G T C A G T C
A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CYGTSAATCACAGCCC
SCTGTCAVTCAV-----
 A C G T A T G C G A C T A C T G A C G T A T G C G T C A G T C A A C G T A G T C G T C A A T G C G C T A C A T G G T A C A G T C A G T C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CYGTSAATCACAGCCC
---TGAGTGACAGSC-
 A T G C G A C T A C T G A C G T A T G C G T C A G T C A A C G T A G T C G T C A A T G C G C T A C A T G G T A C A G T C A G T C
A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CYGTSAATCACAGCCC
---TGACTCA------
 A T G C G A C T A C T G A C G T A T G C G T C A G T C A A C G T A G T C G T C A A T G C G C T A C A T G G T A C A G T C A G T C
A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:CYGTSAATCACAGCCC
--------CACAGN--
 A T G C G A C T A C T G A C G T A T G C G T C A G T C A A C G T A G T C G T C A A T G C G C T A C A T G G T A C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CYGTSAATCACAGCCC
--ATGAGTCATNTNNT
 A T G C G A C T A C T G A C G T A T G C G T C A G T C A A C G T A G T C G T C A A T G C G C T A C A T G G T A C A G T C A G T C
A C G T A C G T T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T

FOSL1/MA0477.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CYGTSAATCACAGCCC
-NATGAGTCACC----
 A T G C G A C T A C T G A C G T A T G C G T C A G T C A A C G T A G T C G T C A A T G C G C T A C A T G G T A C A G T C A G T C
A C G T A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T A C G T A C G T