Information for 20-ATACAGTATTTGA (Motif 33)

C G T A A C G T C G T A A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T A T C G C G T A
Reverse Opposite:
A C G T A T G C C G T A C G T A C G T A A C G T G T C A G T A C A C G T A C T G A C G T G T C A A C G T
p-value:1e-6
log p-value:-1.559e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.2 +/- 20.9bp
Average Position of motif in Background24.5 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----ATACAGTATTTGA
NTTGATACATT------
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T A T C G C G T A
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.54
Offset:7
Orientation:forward strand
Alignment:ATACAGTATTTGA---
-------ATTTGAATT
 C G T A A C G T C G T A A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T A T C G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PB0106.1_Arid5a_2/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ATACAGTATTTGA--
TNNTTTCGTATTNNANN
 A C G T A C G T C G T A A C G T C G T A A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T A T C G C G T A A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:ATACAGTATTTGA-----
--------TTTGAAACCG
 C G T A A C G T C G T A A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PH0116.1_Nkx2-9/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ATACAGTATTTGA---
TTTTAAGTACTTAAATT
 A C G T C G T A A C G T C G T A A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T A T C G C G T A A C G T A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----ATACAGTATTTGA--------
YTKGATAHAGTATTCTWGGTNGGCA
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C G C A T A C T G C T A G C T G A A G C T G C T A G C T A C T G A T C A G G C A T T G C A A C G T A C G T G A T C G A C T G C A T C T A G T A C G G A C T C T A G C A T G C T A G G T A C T C G A

PH0112.1_Nkx2-3/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-ATACAGTATTTGA--
CNTTAAGTACTTAANG
 A C G T C G T A A C G T C G T A A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T A T C G C G T A A C G T A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

Arid5a/MA0602.1/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--ATACAGTATTTGA
NNTNNCAATATTAG-
 A C G T A C G T C G T A A C G T C G T A A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T A T C G C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--ATACAGTATTTGA
NNTNNCAATATTAG-
 A C G T A C G T C G T A A C G T C G T A A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T A T C G C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----ATACAGTATTTGA
AATCAATTCAATAATT--
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T A T C G C G T A
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T A C G T A C G T