Information for 15-CTTTGTGTTTAGCTAA (Motif 29)

A G T C G A C T A C G T A C G T C T A G A C G T A C T G G A C T A C G T A G C T C T G A T A C G G T A C C G A T C G T A C G T A
Reverse Opposite:
C G A T G A C T C G T A C A T G A T G C G A C T T C G A G T C A C T G A T A G C C G T A G A T C G T C A G T C A C G T A C T A G
p-value:1e-8
log p-value:-1.913e+01
Information Content per bp:1.693
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif16.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets56.3 +/- 30.1bp
Average Position of motif in Background56.5 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTGTTTAGCTAA
CCTTTGTTTT-------
 A C G T A G T C G A C T A C G T A C G T C T A G A C G T A C T G G A C T A C G T A G C T C T G A T A C G G T A C C G A T C G T A C G T A
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTTTGTGTTTAGCTAA-
--CTTTGTTTACTTTTN
 A G T C G A C T A C G T A C G T C T A G A C G T A C T G G A C T A C G T A G C T C T G A T A C G G T A C C G A T C G T A C G T A A C G T
A C G T A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTTTGTGTTTAGCTAA
ANTCCTTTGTCTNNNN----
 A C G T A C G T A C G T A C G T A G T C G A C T A C G T A C G T C T A G A C G T A C T G G A C T A C G T A G C T C T G A T A C G G T A C C G A T C G T A C G T A
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTTTGTGTTTAGCTAA
CTTTGT----------
 A G T C G A C T A C G T A C G T C T A G A C G T A C T G G A C T A C G T A G C T C T G A T A C G G T A C C G A T C G T A C G T A
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTTTGTGTTTAGCTAA
----NTGTTTAYATWW
 A G T C G A C T A C G T A C G T C T A G A C G T A C T G G A C T A C G T A G C T C T G A T A C G G T A C C G A T C G T A C G T A
A C G T A C G T A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CTTTGTGTTTAGCTAA
-----TGTTTACTTT-
 A G T C G A C T A C G T A C G T C T A G A C G T A C T G G A C T A C G T A G C T C T G A T A C G G T A C C G A T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTGTTTAGCTAA
CCWTTGTYYB-------
 A C G T A G T C G A C T A C G T A C G T C T A G A C G T A C T G G A C T A C G T A G C T C T G A T A C G G T A C C G A T C G T A C G T A
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTGTTTAGCTAA
CCATTGTTTT-------
 A C G T A G T C G A C T A C G T A C G T C T A G A C G T A C T G G A C T A C G T A G C T C T G A T A C G G T A C C G A T C G T A C G T A
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGTGTTTAGCTAA
NNNTCCTTTGTTCTNNN----
 A C G T A C G T A C G T A C G T A C G T A G T C G A C T A C G T A C G T C T A G A C G T A C T G G A C T A C G T A G C T C T G A T A C G G T A C C G A T C G T A C G T A
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CTTTGTGTTTAGCTAA
-----TGTTTACTTT-
 A G T C G A C T A C G T A C G T C T A G A C G T A C T G G A C T A C G T A G C T C T G A T A C G G T A C C G A T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T