Information for 2-GCDVAGATTT (Motif 2)

C T A G T G A C C T G A T C A G C G T A A T C G T G C A A G C T G C A T C A G T
Reverse Opposite:
G T C A C G T A T C G A A C G T A T G C G C A T A G T C G A C T A C T G A G T C
p-value:1e-22
log p-value:-5.221e+01
Information Content per bp:1.459
Number of Target Sequences with motif204.0
Percentage of Target Sequences with motif27.91%
Number of Background Sequences with motif6674.8
Percentage of Background Sequences with motif13.82%
Average Position of motif in Targets51.2 +/- 24.5bp
Average Position of motif in Background49.9 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:GCDVAGATTT
GCAGTGATTT
 C T A G T G A C C T G A T C A G C G T A A T C G T G C A A G C T G C A T C A G T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-GCDVAGATTT
TGCTGTGATTT
 A C G T C T A G T G A C C T G A T C A G C G T A A T C G T G C A A G C T G C A T C A G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:GCDVAGATTT-
-CNGTGATTTN
 C T A G T G A C C T G A T C A G C G T A A T C G T G C A A G C T G C A T C A G T A C G T
A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCDVAGATTT------
TNNNATGATTTCNNCNN
 A C G T C T A G T G A C C T G A T C A G C G T A A T C G T G C A A G C T G C A T C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

GATA5/MA0766.1/Jaspar

Match Rank:5
Score:0.70
Offset:4
Orientation:forward strand
Alignment:GCDVAGATTT--
----AGATAAGA
 C T A G T G A C C T G A T C A G C G T A A T C G T G C A A G C T G C A T C A G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GCDVAGATTT-
---RGGATTAR
 C T A G T G A C C T G A T C A G C G T A A T C G T G C A A G C T G C A T C A G T A C G T
A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

PB0185.1_Tcf1_2/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCDVAGATTT--
TTGCCCGGATTAGG
 A C G T A C G T C T A G T G A C C T G A T C A G C G T A A T C G T G C A A G C T G C A T C A G T A C G T A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GCDVAGATTT--
----AGATAASR
 C T A G T G A C C T G A T C A G C G T A A T C G T G C A A G C T G C A T C A G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

OTX2/MA0712.1/Jaspar

Match Rank:9
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GCDVAGATTT-
---NGGATTAA
 C T A G T G A C C T G A T C A G C G T A A T C G T G C A A G C T G C A T C A G T A C G T
A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GCDVAGATTT--
--VRGGATTARN
 C T A G T G A C C T G A T C A G C G T A A T C G T G C A A G C T G C A T C A G T A C G T A C G T
A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C