Information for 10-GGGCAAGGCCTGG (Motif 17)

A C T G A C T G A C T G A T G C G T C A C T G A T C A G A C T G A G T C A G T C G C A T C A T G C T A G
Reverse Opposite:
A G T C G A T C C G T A A C T G C T A G G T A C A G T C A G C T A C G T A T C G A G T C A G T C A G T C
p-value:1e-11
log p-value:-2.556e+01
Information Content per bp:1.805
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif44.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets39.1 +/- 29.9bp
Average Position of motif in Background50.0 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGCAAGGCCTGG
AGGTCAAGGTCA--
 A C G T A C T G A C T G A C T G A T G C G T C A C T G A T C A G A C T G A G T C A G T C G C A T C A T G C T A G
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GGGCAAGGCCTGG
-----AGGCCTNG
 A C T G A C T G A C T G A T G C G T C A C T G A T C A G A C T G A G T C A G T C G C A T C A T G C T A G
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGGCAAGGCCTGG
AGGTCAAGGTCA--
 A C G T A C T G A C T G A C T G A T G C G T C A C T G A T C A G A C T G A G T C A G T C G C A T C A T G C T A G
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGGCAAGGCCTGG
TGGGGAAGGGCM--
 A C G T A C T G A C T G A C T G A T G C G T C A C T G A T C A G A C T G A G T C A G T C G C A T C A T G C T A G
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAAGGCCTGG
TNNGGGCAG-------
 A C G T A C G T A C G T A C T G A C T G A C T G A T G C G T C A C T G A T C A G A C T G A G T C A G T C G C A T C A T G C T A G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GGGCAAGGCCTGG
NNNNTTGGGCACNNCN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T G C G T C A C T G A T C A G A C T G A G T C A G T C G C A T C A T G C T A G
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGGCAAGGCCTGG
---CAAGGHCANV
 A C T G A C T G A C T G A T G C G T C A C T G A T C A G A C T G A G T C A G T C G C A T C A T G C T A G
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGGCAAGGCCTGG
GGGGCCGAGGCCTG-
 A C G T A C G T A C T G A C T G A C T G A T G C G T C A C T G A T C A G A C T G A G T C A G T C G C A T C A T G C T A G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGGCAAGGCCTGG
AAGTTCAAGGTCAGC
 A C G T A C G T A C T G A C T G A C T G A T G C G T C A C T G A T C A G A C T G A G T C A G T C G C A T C A T G C T A G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAAGGCCTGG
NGTGGGCAT-------
 A C G T A C G T A C G T A C T G A C T G A C T G A T G C G T C A C T G A T C A G A C T G A G T C A G T C G C A T C A T G C T A G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T