Information for 17-CTGAMCRYTCWSA (Motif 21)

A G T C A C G T A C T G C G T A G T A C A G T C C T A G A G T C A C G T A G T C C G A T A T G C C G T A
Reverse Opposite:
A C G T A T C G C G T A A C T G C G T A C T A G G A C T A C T G A C T G A C G T A G T C C G T A A C T G
p-value:1e-6
log p-value:-1.544e+01
Information Content per bp:1.847
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.9 +/- 26.2bp
Average Position of motif in Background45.4 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGAMCRYTCWSA
-TGACCYCT----
 A G T C A C G T A C T G C G T A G T A C A G T C C T A G A G T C A C G T A G T C C G A T A T G C C G T A
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTGAMCRYTCWSA
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A G T A C A G T C C T A G A G T C A C G T A G T C C G A T A T G C C G T A
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGAMCRYTCWSA
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A G T A C A G T C C T A G A G T C A C G T A G T C C G A T A T G C C G T A
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTGAMCRYTCWSA
CTGACCTTTG---
 A G T C A C G T A C T G C G T A G T A C A G T C C T A G A G T C A C G T A G T C C G A T A T G C C G T A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTGAMCRYTCWSA
-TGACCTTTNCNT
 A G T C A C G T A C T G C G T A G T A C A G T C C T A G A G T C A C G T A G T C C G A T A T G C C G T A
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

NR2F1/MA0017.2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGAMCRYTCWSA
CNNTTGACCTTTG---
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A G T A C A G T C C T A G A G T C A C G T A G T C C G A T A T G C C G T A
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGAMCRYTCWSA
-TGACCT------
 A G T C A C G T A C T G C G T A G T A C A G T C C T A G A G T C A C G T A G T C C G A T A T G C C G T A
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTGAMCRYTCWSA
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A G T A C A G T C C T A G A G T C A C G T A G T C C G A T A T G C C G T A
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

TGIF1/MA0796.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGAMCRYTCWSA
-TGACAGCTGTCA
 A G T C A C G T A C T G C G T A G T A C A G T C C T A G A G T C A C G T A G T C C G A T A T G C C G T A
A C G T G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGAMCRYTCWSA
-TGACCTYA----
 A G T C A C G T A C T G C G T A G T A C A G T C C T A G A G T C A C G T A G T C C G A T A T G C C G T A
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T