Information for 13-BTGAGGCAAGAGG (Motif 15)

A T C G A G C T A C T G C G T A A C T G C T A G G T A C C G T A C G T A A C T G C T G A A T C G A T C G
Reverse Opposite:
A T G C A T G C A G C T A G T C A C G T A C G T A C T G A G T C A G T C A C G T A G T C C T G A T A G C
p-value:1e-9
log p-value:-2.163e+01
Information Content per bp:1.867
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif15.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets55.6 +/- 25.3bp
Average Position of motif in Background54.5 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:BTGAGGCAAGAGG
--AAGGCAAGTGT
 A T C G A G C T A C T G C G T A A C T G C T A G G T A C C G T A C G T A A C T G C T G A A T C G A T C G
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------BTGAGGCAAGAGG-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G C T A C T G C G T A A C T G C T A G G T A C C G T A C G T A A C T G C T G A A T C G A T C G A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:BTGAGGCAAGAGG
ATGATGCAAT---
 A T C G A G C T A C T G C G T A A C T G C T A G G T A C C G T A C G T A A C T G C T G A A T C G A T C G
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-BTGAGGCAAGAGG
NATGTTGCAA----
 A C G T A T C G A G C T A C T G C G T A A C T G C T A G G T A C C G T A C G T A A C T G C T G A A T C G A T C G
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:BTGAGGCAAGAGG
MTGATGCAAT---
 A T C G A G C T A C T G C G T A A C T G C T A G G T A C C G T A C G T A A C T G C T G A A T C G A T C G
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T A C G T

ATF4/MA0833.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--BTGAGGCAAGAGG
GGATGATGCAATA--
 A C G T A C G T A T C G A G C T A C T G C G T A A C T G C T A G G T A C C G T A C G T A A C T G C T G A A T C G A T C G
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:BTGAGGCAAGAGG---
-AGGGGTCAGAGGTCA
 A T C G A G C T A C T G C G T A A C T G C T A G G T A C C G T A C G T A A C T G C T G A A T C G A T C G A C G T A C G T A C G T
A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:BTGAGGCAAGAGG---
--GAGGTCAAAGGTCA
 A T C G A G C T A C T G C G T A A C T G C T A G G T A C C G T A C G T A A C T G C T G A A T C G A T C G A C G T A C G T A C G T
A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

FOS::JUN/MA0099.2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:BTGAGGCAAGAGG
-TGAGTCA-----
 A T C G A G C T A C T G C G T A A C T G C T A G G T A C C G T A C G T A A C T G C T G A A T C G A T C G
A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:BTGAGGCAAGAGG---
--TAGGGCAAAGGTCA
 A T C G A G C T A C T G C G T A A C T G C T A G G T A C C G T A C G T A A C T G C T G A A T C G A T C G A C G T A C G T A C G T
A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A