Information for 7-TGCYGCTCAG (Motif 14)

A G C T A C T G G T A C G A T C C T A G A T G C C G A T A T G C C T G A A C T G
Reverse Opposite:
G T A C A G C T A T C G G C T A A T C G A G T C C T A G A C T G G T A C T C G A
p-value:1e-9
log p-value:-2.263e+01
Information Content per bp:1.741
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif76.7
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets48.5 +/- 30.1bp
Average Position of motif in Background47.7 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGCYGCTCAG
SCTGTCAVTCAV
 A C G T A C G T A G C T A C T G G T A C G A T C C T A G A T G C C G A T A T G C C T G A A C T G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGCYGCTCAG
NCTGTCAATCAN
 A C G T A C G T A G C T A C T G G T A C G A T C C T A G A T G C C G A T A T G C C T G A A C T G
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGCYGCTCAG-
AGCCACTCAAG
 A G C T A C T G G T A C G A T C C T A G A T G C C G A T A T G C C T G A A C T G A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGCYGCTCAG
GSCTGTCACTCA-
 A C G T A C G T A C G T A G C T A C T G G T A C G A T C C T A G A T G C C G A T A T G C C T G A A C T G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGCYGCTCAG--
NNAGTCCCACTCNNNN
 A C G T A C G T A C G T A C G T A G C T A C T G G T A C G A T C C T A G A T G C C G A T A T G C C T G A A C T G A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGCYGCTCAG---
---TGCCCAGNHW
 A G C T A C T G G T A C G A T C C T A G A T G C C G A T A T G C C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TGCYGCTCAG-
-----CACAGN
 A G C T A C T G G T A C G A T C C T A G A T G C C G A T A T G C C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGCYGCTCAG-----
-GCCGCGCAGTGCGT
 A G C T A C T G G T A C G A T C C T A G A T G C C G A T A T G C C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TGCYGCTCAG
----GCTCCG
 A G C T A C T G G T A C G A T C C T A G A T G C C G A T A T G C C T G A A C T G
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGCYGCTCAG----
----DCTCAGCAGG
 A G C T A C T G G T A C G A T C C T A G A T G C C G A T A T G C C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G