Information for 3-GTTNTTKTAATTCAGG (Motif 5)

A C T G A G C T C G A T A C G T A G C T A C G T A C T G C G A T C T G A C G T A G C A T A C G T A T G C C G T A C T A G A C T G
Reverse Opposite:
G T A C A G T C A C G T A T C G G T C A C G T A C G A T A G C T G C T A G T A C T C G A C T G A C G T A C G T A C T G A A G T C
p-value:1e-13
log p-value:-3.211e+01
Information Content per bp:1.734
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets21.6 +/- 12.5bp
Average Position of motif in Background73.6 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.56
Offset:7
Orientation:forward strand
Alignment:GTTNTTKTAATTCAGG-----
-------ACATTCATGACACG
 A C T G A G C T C G A T A C G T A G C T A C G T A C T G C G A T C T G A C G T A G C A T A C G T A T G C C G T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GTTNTTKTAATTCAGG--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C T G A G C T C G A T A C G T A G C T A C G T A C T G C G A T C T G A C G T A G C A T A C G T A T G C C G T A C T A G A C T G A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

PB0001.1_Arid3a_1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTTNTTKTAATTCAGG--
-NNNTTTTAATTAANNNN
 A C T G A G C T C G A T A C G T A G C T A C G T A C T G C G A T C T G A C G T A G C A T A C G T A T G C C G T A C T A G A C T G A C G T A C G T
A C G T C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

PB0176.1_Sox5_2/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GTTNTTKTAATTCAGG-
--TATCATAATTAAGGA
 A C T G A G C T C G A T A C G T A G C T A C G T A C T G C G A T C T G A C G T A G C A T A C G T A T G C C G T A C T A G A C T G A C G T
A C G T A C G T C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GTTNTTKTAATTCAGG--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C T G A G C T C G A T A C G T A G C T A C G T A C T G C G A T C T G A C G T A G C A T A C G T A T G C C G T A C T A G A C T G A C G T A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

UNCX/MA0721.1/Jaspar

Match Rank:6
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GTTNTTKTAATTCAGG
------NTAATTAN--
 A C T G A G C T C G A T A C G T A G C T A C G T A C T G C G A T C T G A C G T A G C A T A C G T A T G C C G T A C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T C T G A C T G A C A G T G A C T C T G A T C A G A C G T A C G T

ALX3/MA0634.1/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GTTNTTKTAATTCAGG
-----NNTAATTAGA-
 A C T G A G C T C G A T A C G T A G C T A C G T A C T G C G A T C T G A C G T A G C A T A C G T A T G C C G T A C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T C T G A C G T A C A G T G A C T C T G A T C A G C T G A A C G T

PH0011.1_Alx1_2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GTTNTTKTAATTCAGG--
-NNNAATTAATTAANGNG
 A C T G A G C T C G A T A C G T A G C T A C G T A C T G C G A T C T G A C G T A G C A T A C G T A T G C C G T A C T A G A C T G A C G T A C G T
A C G T A C T G G A T C G A T C T C G A T C G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A G A C T C A T G A G T C T C A G

PH0069.1_Hoxc4/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GTTNTTKTAATTCAGG--
-NNTNNTTAATTAATNCG
 A C T G A G C T C G A T A C G T A G C T A C G T A C T G C G A T C T G A C G T A G C A T A C G T A T G C C G T A C T A G A C T G A C G T A C G T
A C G T C A G T C G T A A C G T C G A T T C A G G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A G A C T C A G T A G T C A C T G

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GTTNTTKTAATTCAGG----
----AATCAATTCAATAATT
 A C T G A G C T C G A T A C G T A G C T A C G T A C T G C G A T C T G A C G T A G C A T A C G T A T G C C G T A C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T