Information for 1-RMCACACCCH (Motif 1)

C T A G G T A C A G T C T G C A G T A C C T G A A G T C A G T C A G T C G C A T
Reverse Opposite:
C G T A A C T G A C T G C T A G A G C T A C T G A C G T C T A G C A T G G A T C
p-value:1e-36
log p-value:-8.316e+01
Information Content per bp:1.713
Number of Target Sequences with motif113.0
Percentage of Target Sequences with motif13.78%
Number of Background Sequences with motif1565.6
Percentage of Background Sequences with motif3.31%
Average Position of motif in Targets51.9 +/- 24.1bp
Average Position of motif in Background49.7 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:RMCACACCCH
GCCMCRCCCH
 C T A G G T A C A G T C T G C A G T A C C T G A A G T C A G T C A G T C G C A T
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

Klf1/MA0493.1/Jaspar

Match Rank:2
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-RMCACACCCH
GGCCACACCCA
 A C G T C T A G G T A C A G T C T G C A G T A C C T G A A G T C A G T C A G T C G C A T
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A

Klf4/MA0039.2/Jaspar

Match Rank:3
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:RMCACACCCH
GCCCCACCCA
 C T A G G T A C A G T C T G C A G T A C C T G A A G T C A G T C A G T C G C A T
T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:4
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--RMCACACCCH---
NRGCCCCRCCCHBNN
 A C G T A C G T C T A G G T A C A G T C T G C A G T A C C T G A A G T C A G T C A G T C G C A T A C G T A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-RMCACACCCH-
GGCCACACCCAN
 A C G T C T A G G T A C A G T C T G C A G T A C C T G A A G T C A G T C A G T C G C A T A C G T
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-RMCACACCCH-
GGCCACRCCCMK
 A C G T C T A G G T A C A G T C T G C A G T A C C T G A A G T C A G T C A G T C G C A T A C G T
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.90
Offset:0
Orientation:forward strand
Alignment:RMCACACCCH
GCCCCGCCCC
 C T A G G T A C A G T C T G C A G T A C C T G A A G T C A G T C A G T C G C A T
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

SP3/MA0746.1/Jaspar

Match Rank:8
Score:0.90
Offset:0
Orientation:forward strand
Alignment:RMCACACCCH-
GCCACGCCCCC
 C T A G G T A C A G T C T G C A G T A C C T G A A G T C A G T C A G T C G C A T A C G T
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.90
Offset:0
Orientation:forward strand
Alignment:RMCACACCCH
GCCACACCCA
 C T A G G T A C A G T C T G C A G T A C C T G A A G T C A G T C A G T C G C A T
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:RMCACACCCH--
GCCMCGCCCMCY
 C T A G G T A C A G T C T G C A G T A C C T G A A G T C A G T C A G T C G C A T A C G T A C G T
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C