Information for 5-ASTGCTGCYYCCA (Motif 9)

G T C A A T C G A C G T A C T G A T G C C G A T A C T G G T A C A G C T A G T C A G T C G T A C C G T A
Reverse Opposite:
C G A T A C T G T C A G T C A G C T G A A C T G G T A C C G T A A T C G A G T C G T C A A T G C A C G T
p-value:1e-11
log p-value:-2.571e+01
Information Content per bp:1.740
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.21%
Number of Background Sequences with motif111.3
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets41.4 +/- 21.2bp
Average Position of motif in Background48.7 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ASTGCTGCYYCCA
AATTTGCTGAC----
 A C G T A C G T G T C A A T C G A C G T A C T G A T G C C G A T A C T G G T A C A G C T A G T C A G T C G T A C C G T A
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ASTGCTGCYYCCA
TAAAAATGCTGACTT--
 A C G T A C G T A C G T A C G T G T C A A T C G A C G T A C T G A T G C C G A T A C T G G T A C A G C T A G T C A G T C G T A C C G T A
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ASTGCTGCYYCCA
TTRAGTGSYK------
 A C G T A C G T A C G T G T C A A T C G A C G T A C T G A T G C C G A T A C T G G T A C A G C T A G T C A G T C G T A C C G T A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----ASTGCTGCYYCCA
CGAACAGTGCTCACTAT-
 A C G T A C G T A C G T A C G T A C G T G T C A A T C G A C G T A C T G A T G C C G A T A C T G G T A C A G C T A G T C A G T C G T A C C G T A
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ASTGCTGCYYCCA
TTAAGTGCTT------
 A C G T A C G T A C G T G T C A A T C G A C G T A C T G A T G C C G A T A C T G G T A C A G C T A G T C A G T C G T A C C G T A
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ASTGCTGCYYCCA
AAAATGCTGACT---
 A C G T A C G T G T C A A T C G A C G T A C T G A T G C C G A T A C T G G T A C A G C T A G T C A G T C G T A C C G T A
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ASTGCTGCYYCCA
--TGCTGACTCA-
 G T C A A T C G A C G T A C T G A T G C C G A T A C T G G T A C A G C T A G T C A G T C G T A C C G T A
A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---ASTGCTGCYYCCA
TTGAGTGSTT------
 A C G T A C G T A C G T G T C A A T C G A C G T A C T G A T G C C G A T A C T G G T A C A G C T A G T C A G T C G T A C C G T A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---ASTGCTGCYYCCA
AAAWWTGCTGACWWD-
 A C G T A C G T A C G T G T C A A T C G A C G T A C T G A T G C C G A T A C T G G T A C A G C T A G T C A G T C G T A C C G T A
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:ASTGCTGCYYCCA
--NGCTN------
 G T C A A T C G A C G T A C T G A T G C C G A T A C T G G T A C A G C T A G T C A G T C G T A C C G T A
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T