Information for 3-SGAGGSCACGCSC (Motif 5)

A T C G C A T G C T G A A C T G A C T G A T C G T A G C C G T A G T A C C T A G A G T C A T G C T A G C
Reverse Opposite:
A C T G T A C G A C T G A G T C A C T G A C G T A C T G A T G C A G T C A G T C A G C T G T A C A T G C
p-value:1e-13
log p-value:-3.131e+01
Information Content per bp:1.748
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif65.4
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets51.4 +/- 23.2bp
Average Position of motif in Background45.1 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf12/MA0742.1/Jaspar

Match Rank:1
Score:0.76
Offset:3
Orientation:forward strand
Alignment:SGAGGSCACGCSC-----
---GACCACGCCCTTATT
 A T C G C A T G C T G A A C T G A C T G A T C G T A G C C G T A G T A C C T A G A G T C A T G C T A G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:SGAGGSCACGCSC--
---GGCCACRCCCMK
 A T C G C A T G C T G A A C T G A C T G A T C G T A G C C G T A G T A C C T A G A G T C A T G C T A G C A C G T A C G T
A C G T A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

KLF14/MA0740.1/Jaspar

Match Rank:3
Score:0.71
Offset:3
Orientation:forward strand
Alignment:SGAGGSCACGCSC----
---GGCCACGCCCCCTT
 A T C G C A T G C T G A A C T G A C T G A T C G T A G C C G T A G T A C C T A G A G T C A T G C T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T

SP4/MA0685.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:SGAGGSCACGCSC-----
-TAAGCCACGCCCCCTTT
 A T C G C A T G C T G A A C T G A C T G A T C G T A G C C G T A G T A C C T A G A G T C A T G C T A G C A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:SGAGGSCACGCSC
------CACGCA-
 A T C G C A T G C T G A A C T G A C T G A T C G T A G C C G T A G T A C C T A G A G T C A T G C T A G C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:SGAGGSCACGCSC---
-NNGGCCACGCCTTTN
 A T C G C A T G C T G A A C T G A C T G A T C G T A G C C G T A G T A C C T A G A G T C A T G C T A G C A C G T A C G T A C G T
A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:SGAGGSCACGCSC-
----GCCMCRCCCH
 A T C G C A T G C T G A A C T G A C T G A T C G T A G C C G T A G T A C C T A G A G T C A T G C T A G C A C G T
A C G T A C G T A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

KLF13/MA0657.1/Jaspar

Match Rank:8
Score:0.67
Offset:2
Orientation:forward strand
Alignment:SGAGGSCACGCSC-------
--ATGCCACGCCCCTTTTTG
 A T C G C A T G C T G A A C T G A C T G A T C G T A G C C G T A G T A C C T A G A G T C A T G C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:9
Score:0.67
Offset:4
Orientation:forward strand
Alignment:SGAGGSCACGCSC---
----GCCACRCCCACY
 A T C G C A T G C T G A A C T G A C T G A T C G T A G C C G T A G T A C C T A G A G T C A T G C T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

Hes1/MA1099.1/Jaspar

Match Rank:10
Score:0.66
Offset:4
Orientation:forward strand
Alignment:SGAGGSCACGCSC-
----GGCACGCGTC
 A T C G C A T G C T G A A C T G A C T G A T C G T A G C C G T A G T A C C T A G A G T C A T G C T A G C A C G T
A C G T A C G T A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C