Information for 13-GCAGACGCAAATTCAG (Motif 29)

A C T G T A G C G C T A T A C G T G C A T A G C A T C G T A G C T G C A T C G A T C G A A C G T A C G T A T G C G C T A T A C G
Reverse Opposite:
A T G C C G A T T A C G T C G A T G C A A G C T A C G T A C G T A T C G T A G C A T C G A C G T A T G C C G A T A T C G G T A C
p-value:1e-8
log p-value:-1.978e+01
Information Content per bp:1.479
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.5 +/- 10.4bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCAGACGCAAATTCAG
CCAGACRSVB------
 A C T G T A G C G C T A T A C G T G C A T A G C A T C G T A G C T G C A T C G A T C G A A C G T A C G T A T G C G C T A T A C G
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCAGACGCAAATTCAG
CCAGACAG--------
 A C T G T A G C G C T A T A C G T G C A T A G C A T C G T A G C T G C A T C G A T C G A A C G T A C G T A T G C G C T A T A C G
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCAGACGCAAATTCAG
TGCTGACTCA-------
 A C G T A C T G T A G C G C T A T A C G T G C A T A G C A T C G T A G C T G C A T C G A T C G A A C G T A C G T A T G C G C T A T A C G
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:4
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GCAGACGCAAATTCAG
TGCGCAGGCGC--------
 A C G T A C G T A C G T A C T G T A G C G C T A T A C G T G C A T A G C A T C G T A G C T G C A T C G A T C G A A C G T A C G T A T G C G C T A T A C G
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----GCAGACGCAAATTCAG
AGCAACAGCCGCACC-----
 A C G T A C G T A C G T A C G T A C T G T A G C G C T A T A C G T G C A T A G C A T C G T A G C T G C A T C G A T C G A A C G T A C G T A T G C G C T A T A C G
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GCAGACGCAAATTCAG----
YCAGGCWCAGTACCAGGCTC
 A C T G T A G C G C T A T A C G T G C A T A G C A T C G T A G C T G C A T C G A T C G A A C G T A C G T A T G C G C T A T A C G A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

HINFP/MA0131.2/Jaspar

Match Rank:7
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--GCAGACGCAAATTCAG
NCGCGGACGTTG------
 A C G T A C G T A C T G T A G C G C T A T A C G T G C A T A G C A T C G T A G C T G C A T C G A T C G A A C G T A C G T A T G C G C T A T A C G
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GCAGACGCAAATTCAG
CGCAGCTGCG-------
 A C G T A C T G T A G C G C T A T A C G T G C A T A G C A T C G T A G C T G C A T C G A T C G A A C G T A C G T A T G C G C T A T A C G
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:9
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GCAGACGCAAATTCAG
TGCTGAGTCA-------
 A C G T A C T G T A G C G C T A T A C G T G C A T A G C A T C G T A G C T G C A T C G A T C G A A C G T A C G T A T G C G C T A T A C G
C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GCAGACGCAAATTCAG
BCAGACWA--------
 A C T G T A G C G C T A T A C G T G C A T A G C A T C G T A G C T G C A T C G A T C G A A C G T A C G T A T G C G C T A T A C G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T