Information for 11-TAGTTCTCAGTGCTAC (Motif 27)

A C G T C G T A A C T G A C G T A C G T T G A C A C G T A G T C C G T A A T C G C G A T A C T G A G T C C G A T C G T A A G T C
Reverse Opposite:
T C A G A C G T C G T A C T A G A G T C C G T A A T G C A C G T A C T G C G T A A C T G C G T A C G T A A G T C A C G T C G T A
p-value:1e-8
log p-value:-1.978e+01
Information Content per bp:1.906
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.8 +/- 11.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX4/MA0799.1/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TAGTTCTCAGTGCTAC-
-CGTTGCCATGGCAACN
 A C G T C G T A A C T G A C G T A C G T T G A C A C G T A G T C C G T A A T C G C G A T A C T G A G T C C G A T C G T A A G T C A C G T
A C G T A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C G T A G A T C T A C G

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:2
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TAGTTCTCAGTGCTAC-
--GTTGCCATGGCAACM
 A C G T C G T A A C T G A C G T A C G T T G A C A C G T A G T C C G T A A T C G C G A T A C T G A G T C C G A T C G T A A G T C A C G T
A C G T A C G T C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TAGTTCTCAGTGCTAC
CGAACAGTGCTCACTAT---
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T T G A C A C G T A G T C C G T A A T C G C G A T A C T G A G T C C G A T C G T A A G T C
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T A C G T A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TAGTTCTCAGTGCTAC--
--GTTGCCATGGCAACCG
 A C G T C G T A A C T G A C G T A C G T T G A C A C G T A G T C C G T A A T C G C G A T A C T G A G T C C G A T C G T A A G T C A C G T A C G T
A C G T A C G T C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G

RFX3/MA0798.1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TAGTTCTCAGTGCTAC-
-CGTTGCCATGGCAACN
 A C G T C G T A A C T G A C G T A C G T T G A C A C G T A G T C C G T A A T C G C G A T A C T G A G T C C G A T C G T A A G T C A C G T
A C G T A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G

RFX2/MA0600.2/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TAGTTCTCAGTGCTAC-
-CGTTGCCATGGCAACG
 A C G T C G T A A C T G A C G T A C G T T G A C A C G T A G T C C G T A A T C G C G A T A C T G A G T C C G A T C G T A A G T C A C G T
A C G T A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A A G T C T A C G

Rfx1/MA0509.1/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TAGTTCTCAGTGCTAC
--GTTGCCATGGCAAC
 A C G T C G T A A C T G A C G T A C G T T G A C A C G T A G T C C G T A A T C G C G A T A C T G A G T C C G A T C G T A A G T C
A C G T A C G T C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C

RFX5/MA0510.2/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TAGTTCTCAGTGCTAC-
-NGTTGCCATGGCAACG
 A C G T C G T A A C T G A C G T A C G T T G A C A C G T A G T C C G T A A T C G C G A T A C T G A G T C C G A T C G T A A G T C A C G T
A C G T A T G C C T A G A C G T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T C G A G A T C T A C G

HMBOX1/MA0895.1/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--TAGTTCTCAGTGCTAC
ACTAGTTAAC--------
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T T G A C A C G T A G T C C G T A A T C G C G A T A C T G A G T C C G A T C G T A A G T C
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:10
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----TAGTTCTCAGTGCTAC
ANNNCTAGTTAACNGNN----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T T G A C A C G T A G T C C G T A A T C G C G A T A C T G A G T C C G A T C G T A A G T C
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T A C G T A C G T A C G T A C G T