Information for 14-TTTGAATGCCATGCCG (Motif 18)

A C G T G A C T A C G T A C T G C G T A C G T A C G A T A C T G A G T C G T A C C G T A A G C T A C T G A G T C A T G C A C T G
Reverse Opposite:
A G T C A T C G C T A G A G T C C T G A A C G T A C T G A C T G A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A
p-value:1e-9
log p-value:-2.135e+01
Information Content per bp:1.918
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.0 +/- 26.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTTGAATGCCATGCCG
ATTTGAATT--------
 A C G T A C G T G A C T A C G T A C T G C G T A C G T A C G A T A C T G A G T C G T A C C G T A A G C T A C T G A G T C A T G C A C T G
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTGAATGCCATGCCG
TTTGAAACCG------
 A C G T G A C T A C G T A C T G C G T A C G T A C G A T A C T G A G T C G T A C C G T A A G C T A C T G A G T C A T G C A C T G
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTTGAATGCCATGCCG
-BTGABTGACAGS---
 A C G T G A C T A C G T A C T G C G T A C G T A C G A T A C T G A G T C G T A C C G T A A G C T A C T G A G T C A T G C A C T G
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTTGAATGCCATGCCG
-TTGAATGAAATTCGA
 A C G T G A C T A C G T A C T G C G T A C G T A C G A T A C T G A G T C G T A C C G T A A G C T A C T G A G T C A T G C A C T G
A C G T A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTTGAATGCCATGCCG
ATTTGCATACAATGG--
 A C G T A C G T G A C T A C G T A C T G C G T A C G T A C G A T A C T G A G T C G T A C C G T A A G C T A C T G A G T C A T G C A C T G
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTTGAATGCCATGCCG
--TGAGTGACAGSC--
 A C G T G A C T A C G T A C T G C G T A C G T A C G A T A C T G A G T C G T A C C G T A A G C T A C T G A G T C A T G C A C T G
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTTGAATGCCATGCCG
-NTGATTGACAGN---
 A C G T G A C T A C G T A C T G C G T A C G T A C G A T A C T G A G T C G T A C C G T A A G C T A C T G A G T C A T G C A C T G
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TTTGAATGCCATGCCG
---AGATGCAATCCC-
 A C G T G A C T A C G T A C T G C G T A C G T A C G A T A C T G A G T C G T A C C G T A A G C T A C T G A G T C A T G C A C T G
A C G T A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TTTGAATGCCATGCCG
NTTNTATGAATGTGNNC---
 A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A C G T A C G A T A C T G A G T C G T A C C G T A A G C T A C T G A G T C A T G C A C T G
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TTTGAATGCCATGCCG
-TTCAAGGTCAT----
 A C G T G A C T A C G T A C T G C G T A C G T A C G A T A C T G A G T C G T A C C G T A A G C T A C T G A G T C A T G C A C T G
A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T A C G T A C G T