Information for 6-TGARGDTTGACTT (Motif 10)

A C G T C T A G C G T A C T G A C T A G C A G T G A C T C G A T A C T G T C G A G A T C A G C T C G A T
Reverse Opposite:
C G T A C T G A C T A G A G C T A G T C C G T A C T G A G T C A G A T C A G C T A C G T G A T C G T C A
p-value:1e-10
log p-value:-2.385e+01
Information Content per bp:1.713
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif5.10%
Number of Background Sequences with motif243.3
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets68.9 +/- 19.1bp
Average Position of motif in Background46.8 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.69
Offset:6
Orientation:reverse strand
Alignment:TGARGDTTGACTT--
------TTGACTTTT
 A C G T C T A G C G T A C T G A C T A G C A G T G A C T C G A T A C T G T C G A G A T C A G C T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGARGDTTGACTT----
--AGAAATGACTTCCCT
 A C G T C T A G C G T A C T G A C T A G C A G T G A C T C G A T A C T G T C G A G A T C A G C T C G A T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGARGDTTGACTT-
TGACCTTTGACCTC
 A C G T C T A G C G T A C T G A C T A G C A G T G A C T C G A T A C T G T C G A G A T C A G C T C G A T A C G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGARGDTTGACTT--
GTTGACCTTTGACCTTT
 A C G T A C G T A C G T C T A G C G T A C T G A C T A G C A G T G A C T C G A T A C T G T C G A G A T C A G C T C G A T A C G T A C G T
T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T

Nr2f6/MA0677.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGARGDTTGACTT-
TGACCTTTGACCTN
 A C G T C T A G C G T A C T G A C T A G C A G T G A C T C G A T A C T G T C G A G A T C A G C T C G A T A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGARGDTTGACTT-----
--NNATTGGACTTTNGNN
 A C G T C T A G C G T A C T G A C T A G C A G T G A C T C G A T A C T G T C G A G A T C A G C T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGARGDTTGACTT-
TGACCTTTGACCCC
 A C G T C T A G C G T A C T G A C T A G C A G T G A C T C G A T A C T G T C G A G A T C A G C T C G A T A C G T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

RXRG/MA0856.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGARGDTTGACTT-
TGACCTTTGACCCC
 A C G T C T A G C G T A C T G A C T A G C A G T G A C T C G A T A C T G T C G A G A T C A G C T C G A T A C G T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

POL002.1_INR/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TGARGDTTGACTT
--NNNANTGA---
 A C G T C T A G C G T A C T G A C T A G C A G T G A C T C G A T A C T G T C G A G A T C A G C T C G A T
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGARGDTTGACTT
ATGATKGATGRC--
 A C G T A C G T C T A G C G T A C T G A C T A G C A G T G A C T C G A T A C T G T C G A G A T C A G C T C G A T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T A C G T