Information for 5-CAGCATTTCCCACAGC (Motif 9)

A G T C C T G A T C A G A G T C C G T A A C G T C A G T A C G T G T A C A G T C A G T C G T C A A G T C C T G A C T A G A G T C
Reverse Opposite:
T C A G A G T C A G C T A C T G A C G T C T A G C T A G A C T G G T C A G C T A C G T A A C G T C T A G A G T C G A C T C T A G
p-value:1e-10
log p-value:-2.360e+01
Information Content per bp:1.765
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.4 +/- 22.3bp
Average Position of motif in Background78.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CAGCATTTCCCACAGC
----HTTTCCCASG--
 A G T C C T G A T C A G A G T C C G T A A C G T C A G T A C G T G T A C A G T C A G T C G T C A A G T C C T G A C T A G A G T C
A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CAGCATTTCCCACAGC
----ATTTTCCATT--
 A G T C C T G A T C A G A G T C C G T A A C G T C A G T A C G T G T A C A G T C A G T C G T C A A G T C C T G A C T A G A G T C
A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CAGCATTTCCCACAGC
----ATTTCCAAGAA-
 A G T C C T G A T C A G A G T C C G T A A C G T C A G T A C G T G T A C A G T C A G T C G T C A A G T C C T G A C T A G A G T C
A C G T A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAGCATTTCCCACAGC-
-ANNTTTTACGACNTNN
 A G T C C T G A T C A G A G T C C G T A A C G T C A G T A C G T G T A C A G T C A G T C G T C A A G T C C T G A C T A G A G T C A C G T
A C G T T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CAGCATTTCCCACAGC
----ATTTCCTGTN--
 A G T C C T G A T C A G A G T C C G T A A C G T C A G T A C G T G T A C A G T C A G T C G T C A A G T C C T G A C T A G A G T C
A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CAGCATTTCCCACAGC
----ATTTTCCATT--
 A G T C C T G A T C A G A G T C C G T A A C G T C A G T A C G T G T A C A G T C A G T C G T C A A G T C C T G A C T A G A G T C
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CAGCATTTCCCACAGC-
NNNATTTTACGACNNTN
 A G T C C T G A T C A G A G T C C G T A A C G T C A G T A C G T G T A C A G T C A G T C G T C A A G T C C T G A C T A G A G T C A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGCATTTCCCACAGC
GGGAATTTCC------
 A G T C C T G A T C A G A G T C C G T A A C G T C A G T A C G T G T A C A G T C A G T C G T C A A G T C C T G A C T A G A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CAGCATTTCCCACAGC
-NNAATTAGTCACGGT
 A G T C C T G A T C A G A G T C C G T A A C G T C A G T A C G T G T A C A G T C A G T C G T C A A G T C C T G A C T A G A G T C
A C G T A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

PB0115.1_Ehf_2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CAGCATTTCCCACAGC
TAGTATTTCCGATCTT
 A G T C C T G A T C A G A G T C C G T A A C G T C A G T A C G T G T A C A G T C A G T C G T C A A G T C C T G A C T A G A G T C
C G A T C G T A T C A G C A G T C T G A A C G T C G A T C G A T G A T C G A T C A C T G G C T A G C A T T A G C C G A T G C A T