Information for 2-TTCCTGGATT (Motif 6)

C G A T A G C T A G T C A G T C C G A T A C T G A C T G T C G A A C G T A C G T
Reverse Opposite:
C G T A C G T A A G C T A G T C A G T C C G T A A C T G T C A G T C G A C G T A
p-value:1e-11
log p-value:-2.720e+01
Information Content per bp:1.848
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif4.64%
Number of Background Sequences with motif154.5
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets48.3 +/- 29.7bp
Average Position of motif in Background53.0 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0185.1_Tcf1_2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TTCCTGGATT---
TTGCCCGGATTAGG
 A C G T C G A T A G C T A G T C A G T C C G A T A C T G A C T G T C G A A C G T A C G T A C G T A C G T A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTCCTGGATT----
TTTCCTGGAAAGNNN
 A C G T C G A T A G C T A G T C A G T C C G A T A C T G A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TTCCTGGATT-
---NGGGATTA
 C G A T A G C T A G T C A G T C C G A T A C T G A C T G T C G A A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTCCTGGATT
CTTCCNGGAA-
 A C G T C G A T A G C T A G T C A G T C C G A T A C T G A C T G T C G A A C G T A C G T
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTCCTGGATT---
TTTCCTAGAAAGCA
 A C G T C G A T A G C T A G T C A G T C C G A T A C T G A C T G T C G A A C G T A C G T A C G T A C G T A C G T
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TTCCTGGATT--
----GGGATTAA
 C G A T A G C T A G T C A G T C C G A T A C T G A C T G T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TTCCTGGATT---
----GGGATTANN
 C G A T A G C T A G T C A G T C C G A T A C T G A C T G T C G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TTCCTGGATT---
-----GGATTAGC
 C G A T A G C T A G T C A G T C C G A T A C T G A C T G T C G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TTCCTGGATT---
---VRGGATTARN
 C G A T A G C T A G T C A G T C C G A T A C T G A C T G T C G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PB0162.1_Sfpi1_2/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTCCTGGATT--
GGTTCCNNAATTTG
 A C G T A C G T C G A T A G C T A G T C A G T C C G A T A C T G A C T G T C G A A C G T A C G T A C G T A C G T
C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G